RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 C16orf86Q6ZW13 317 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 MTMR4Q9NYA4 1195 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 HOXC10Q9NYD6 342 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 ZBTB16Q05516 673 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 ALCAMQ13740 583 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 PHLPP2Q6ZVD8 1323 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.07■□□□□ 0.48
SCN3B-202ENST00000392770 POTEB3A0JP26 581 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 POTECB2RU33 542 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 THAP12O43422 761 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 MARK3P27448 753 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 TTBK2Q6IQ55 1244 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 POTEBQ6S5H4 581 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 BEGAINQ9BUH8 593 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 PPANQ9NQ55 473 aaKnown RBP18.07■□□□□ 0.48
SCN3B-202ENST00000392770 HADHQ16836 314 aaKnown RBP18.07■□□□□ 0.48
SCN3B-202ENST00000392770 FBXO2Q9UK22 296 aaPredicted RBP18.07■□□□□ 0.48
SCN3B-202ENST00000392770 EIF4A3P38919 411 aaKnown RBP18.07■□□□□ 0.48
SCN3B-202ENST00000392770 COASYQ13057 564 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 SFR1Q86XK3 245 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 ZNF526Q8TF50 670 aaPredicted RBP18.07■□□□□ 0.48
SCN3B-202ENST00000392770 SPZ1Q9BXG8 430 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 AP5M1Q9H0R1 490 aa18.07■□□□□ 0.48
SCN3B-202ENST00000392770 GOLGA8IPA6NC78 632 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 GOLGA8JA6NMD2 632 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 BPIFB4P59827 614 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 RUFY4Q6ZNE9 571 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 FAM20AQ96MK3 541 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 SPTLC3Q9NUV7 552 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 TLR3O15455 904 aaKnown RBP18.06■□□□□ 0.48
SCN3B-202ENST00000392770 SERPING1P05155 500 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 NLRP7Q8WX94 980 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 PPP1R16BQ96T49 567 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 NDC80O14777 642 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 FOXN1O15353 648 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 MOCS3O95396 460 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 VIMP08670 466 aaKnown RBP18.06■□□□□ 0.48
SCN3B-202ENST00000392770 PEX3P56589 373 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 MFAP3LO75121 409 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 GRK7Q8WTQ7 553 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 RSAD2Q8WXG1 361 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 ARID5BQ14865 1188 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 CDC23Q9UJX2 597 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 ZNRF3Q9ULT6 936 aa18.06■□□□□ 0.48
SCN3B-202ENST00000392770 DENND2CQ68D51 928 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 HHIPL2Q6UWX4 724 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 PLCB1Q9NQ66 1216 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 TBC1D8O95759 1140 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 PPARDQ03181 441 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 PCDHA13Q9Y5I0 950 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 MESDQ14696 234 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 NACA2Q9H009 215 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 HESX1Q9UBX0 185 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 FAM205CA6NFA0 338 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 SPP2Q13103 211 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 GIMAP7Q8NHV1 300 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 STXBP2Q15833 593 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 SPOUT1Q5T280 376 aaKnown RBP18.05■□□□□ 0.48
SCN3B-202ENST00000392770 STYK1Q6J9G0 422 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 CCDC170Q8IYT3 715 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 DPH5Q9H2P9 285 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 RNF146Q9NTX7 359 aa18.05■□□□□ 0.48
SCN3B-202ENST00000392770 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 FEZ2Q9UHY8 353 aaPredicted RBP18.04■□□□□ 0.48
SCN3B-202ENST00000392770 PNMA3Q9UL41 463 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 POTEFA5A3E0 1075 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 NDUFA10O95299 355 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 POTEIP0CG38 1075 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 POTEGQ6S5H5 508 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 POTEEQ6S8J3 1075 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 TAOK1Q7L7X3 1001 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 CLEC10AQ8IUN9 316 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 RASA1P20936 1047 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 ITIH3Q06033 890 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 SRGAP1Q7Z6B7 1085 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 CROCCP2Q86T23 111 aa18.04■□□□□ 0.48
SCN3B-202ENST00000392770 CTDNEP1O95476 244 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 POLR2BP30876 1174 aaKnown RBP18.03■□□□□ 0.48
SCN3B-202ENST00000392770 ZNF653Q96CK0 615 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 TBC1D22BQ9NU19 505 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 ADCY8P40145 1251 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 ZNF543Q08ER8 600 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.03■□□□□ 0.48
SCN3B-202ENST00000392770 VPS37BQ9H9H4 285 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 C3P01024 1663 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 TNS2Q63HR2 1409 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 PVALEFA0A1B0GWK0 134 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 SRGAP2CP0DJJ0 459 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 MXI1P50539 228 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 OSTNP61366 133 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 PADI6Q6TGC4 694 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 TFAMQ00059 246 aaKnown RBP18.03■□□□□ 0.48
SCN3B-202ENST00000392770 NAA35Q5VZE5 725 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 RPAP3Q9H6T3 665 aaPredicted RBP18.03■□□□□ 0.48
SCN3B-202ENST00000392770 ATP6V0A4Q9HBG4 840 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 CTNNA1P35221 906 aaKnown RBP18.03■□□□□ 0.48
SCN3B-202ENST00000392770 USP11P51784 963 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 KAZNQ674X7 775 aa18.03■□□□□ 0.48
SCN3B-202ENST00000392770 RIOK1Q9BRS2 568 aaKnown RBP18.03■□□□□ 0.48
SCN3B-202ENST00000392770 SHPRHQ149N8 1683 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms