RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 EIF3JO75822 258 aaKnown RBP10.64□□□□□ -0.71
COL6A3-204ENST00000392003 GNA14O95837 355 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 FOSP01100 380 aaPredicted RBP10.64□□□□□ -0.71
COL6A3-204ENST00000392003 MCM3P25205 808 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 ZNF76P36508 570 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 VAV2P52735 878 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 FKBP1AP62942 108 aaKnown RBP10.64□□□□□ -0.71
COL6A3-204ENST00000392003 IQCEQ6IPM2 695 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 ZNF662Q6ZS27 426 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 THOC1Q96FV9 657 aaKnown RBP10.64□□□□□ -0.71
COL6A3-204ENST00000392003 UIMC1Q96RL1 719 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 COL4A3BPQ9Y5P4 624 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 STK24Q9Y6E0 443 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 H0YHG0 523 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 POLR3GO15318 223 aaPredicted RBP10.64□□□□□ -0.71
COL6A3-204ENST00000392003 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
COL6A3-204ENST00000392003 PLA2G4AP47712 749 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 SARNPP82979 210 aaKnown RBP10.64□□□□□ -0.71
COL6A3-204ENST00000392003 RRAGAQ7L523 313 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 CCDC91Q7Z6B0 441 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 RPGRIP1Q96KN7 1286 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 IDI2Q9BXS1 227 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 ACBD3Q9H3P7 528 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 LUC7LQ9NQ29 371 aaKnown RBP10.64□□□□□ -0.71
COL6A3-204ENST00000392003 TBC1D7Q9P0N9 293 aa10.64□□□□□ -0.71
COL6A3-204ENST00000392003 MACROD2A1Z1Q3 448 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 E9PMD0 336 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 F5H6K3 240 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 ENC1O14682 589 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 GH2P01242 217 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 KLRC3Q07444 240 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 TRAF1Q13077 416 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 C11orf91Q3C1V1 193 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 FOXR2Q6PJQ5 311 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 HDXQ7Z353 690 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 MSANTD4Q8NCY6 345 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 IFIH1Q9BYX4 1025 aaKnown RBP10.63□□□□□ -0.71
COL6A3-204ENST00000392003 EDEM3Q9BZQ6 932 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 JADE2Q9NQC1 790 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 RGS17Q9UGC6 210 aaPredicted RBP10.63□□□□□ -0.71
COL6A3-204ENST00000392003 PLAGL2Q9UPG8 496 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 EDIL3O43854 480 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 TBC1D8O95759 1140 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 PAX7P23759 505 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 MAP2K2P36507 400 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 CYP27A1Q02318 531 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 SMC1AQ14683 1233 aaKnown RBP10.63□□□□□ -0.71
COL6A3-204ENST00000392003 USH1GQ495M9 461 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 PRR16Q569H4 304 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 TDRD12Q587J7 1177 aaKnown RBP10.63□□□□□ -0.71
COL6A3-204ENST00000392003 NCAPH2Q6IBW4 605 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 MOXD1Q6UVY6 613 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 NELFCDQ8IXH7 590 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 GJA10Q969M2 543 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 CEP63Q96MT8 703 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 NUCKS1Q9H1E3 243 aaKnown RBP10.63□□□□□ -0.71
COL6A3-204ENST00000392003 PIM2Q9P1W9 311 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 FAM198AQ9UFP1 575 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 POTEB3A0JP26 581 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 POTECB2RU33 542 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 ARHGAP4P98171 946 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 HYIQ5T013 277 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 SYDE2Q5VT97 1194 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 RSBN1LQ6PCB5 846 aaPredicted RBP10.63□□□□□ -0.71
COL6A3-204ENST00000392003 POTEBQ6S5H4 581 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 SPICE1Q8N0Z3 855 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 HNRNPLLQ8WVV9 542 aaKnown RBP10.63□□□□□ -0.71
COL6A3-204ENST00000392003 DNAJC19Q96DA6 116 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 ALS2CR12Q96Q35 445 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 DNM3Q9UQ16 869 aa10.63□□□□□ -0.71
COL6A3-204ENST00000392003 LTBP1Q14766 1721 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 ANO9A1A5B4 782 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 ANKRD65E5RJM6 399 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 BMP3P12645 472 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 ERCC3P19447 782 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 MTA1Q13330 715 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 TTC31Q49AM3 519 aaPredicted RBP10.62□□□□□ -0.71
COL6A3-204ENST00000392003 TRAPPC11Q7Z392 1133 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 TRIM58Q8NG06 486 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 SLC16A10Q8TF71 515 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 DNAJC18Q9H819 358 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 ANKZF1Q9H8Y5 726 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 SIK3Q9Y2K2 1263 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL6A3-204ENST00000392003 MYH4Q9Y623 1939 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 RASSF10A6NK89 507 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 CETN3O15182 167 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
COL6A3-204ENST00000392003 FAM163BP0C2L3 166 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 EIF4A3P38919 411 aaKnown RBP10.62□□□□□ -0.71
COL6A3-204ENST00000392003 MAGEA1P43355 309 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 KIF11P52732 1056 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 AMPD2Q01433 879 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 ECM1Q16610 540 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 CAPZA3Q96KX2 299 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 RAB21Q9UL25 225 aa10.62□□□□□ -0.71
COL6A3-204ENST00000392003 CYP3A7-CYP3A51PA0A087WV96 503 aa10.61□□□□□ -0.71
COL6A3-204ENST00000392003 TBX3O15119 743 aa10.61□□□□□ -0.71
COL6A3-204ENST00000392003 ENTPD3O75355 529 aa10.61□□□□□ -0.71
COL6A3-204ENST00000392003 ATP1A1P05023 1023 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms