RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 HSD3B2P26439 372 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 CFPP27918 469 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 GJA4P35212 333 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 DALRD3Q5D0E6 543 aaKnown RBP4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 PIK3R6Q5UE93 754 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 TCERG1LQ5VWI1 586 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 BTBD8Q5XKL5 378 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 CNNM4Q6P4Q7 775 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 HHIPL2Q6UWX4 724 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 DHX37Q8IY37 1157 aaKnown RBP4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 C2orf69Q8N8R5 385 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 FNIP1Q8TF40 1166 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 ZBTB8AQ96BR9 441 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 NOX5Q96PH1 765 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 GORASP1Q9BQQ3 440 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 IRF2BPLQ9H1B7 796 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 CABP5Q9NP86 173 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 RIC8BQ9NVN3 520 aa4.46□□□□□ -1.7
RNU6-550P-201ENST00000391057 SMARCA5O60264 1052 aaPredicted RBP4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 CLASP2O75122 1294 aaKnown RBP4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 HIP1RO75146 1068 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 PTPN1P18031 435 aaKnown RBP4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 NEK4P51957 841 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 ITGA1P56199 1179 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 HTRA3P83110 453 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 CAP1Q01518 475 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 SMAD4Q13485 552 aaKnown RBP4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 CFAP100Q494V2 611 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 CDCA2Q69YH5 1023 aaPredicted RBP4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 VASNQ6EMK4 673 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 LRRTM3Q86VH5 581 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 CILP2Q8IUL8 1156 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 TTLL6Q8N841 843 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 KYQ8NBH2 561 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 CHST14Q8NCH0 376 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 DACT3Q96B18 629 aaPredicted RBP4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 TMEM209Q96SK2 561 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 C11orf84Q9BUA3 381 aaPredicted RBP4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 PDGFDQ9GZP0 370 aaPredicted RBP4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 HSPBP1Q9NZL4 362 aa4.45□□□□□ -1.7
RNU6-550P-201ENST00000391057 PRAMEF25A6NGN4 478 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 FAM90A27PA6NNH2 459 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 SCDO00767 359 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 KPNA6O60684 536 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 KRT37O76014 449 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 GYS2P54840 703 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 ARHGAP44Q17R89 818 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 TM4SF20Q53R12 229 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 CD276Q5ZPR3 534 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 CPZQ66K79 652 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 TMC5Q6UXY8 1006 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 SAPCD2Q86UD0 394 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 STK32CQ86UX6 486 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 NOSTRINQ8IVI9 506 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 PPM1KQ8N3J5 372 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 LINC00482Q8N8I6 264 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 WNK4Q96J92 1243 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 ZSWIM3Q96MP5 696 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 CLIC6Q96NY7 704 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 WRNIP1Q96S55 665 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 SYT3Q9BQG1 590 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 BOCQ9BWV1 1114 aa4.44□□□□□ -1.7
RNU6-550P-201ENST00000391057 ACOT7O00154 380 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 CBX4O00257 560 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 ENO2P09104 434 aaPredicted RBP4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 THBS2P35442 1172 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 MECP2P51608 486 aaKnown RBP4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 IRF9Q00978 393 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 ADAM9Q13443 819 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 VWA3BQ502W6 1294 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 LIPIQ6XZB0 460 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 TTLL7Q6ZT98 887 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 OTOP1Q7RTM1 612 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 PROSER1Q86XN7 944 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 C1QL4Q86Z23 238 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 AHI1Q8N157 1196 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 LINC01356Q8N9X3 169 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 DDX1Q92499 740 aaKnown RBP4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 TARS2Q9BW92 718 aaKnown RBP4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 DLL4Q9NR61 685 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 ARHGAP28Q9P2N2 729 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 RBPJLQ9UBG7 517 aa4.43□□□□□ -1.7
RNU6-550P-201ENST00000391057 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 PTPDC1A2A3K4 754 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 ZNF839A8K0R7 811 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 H7C1D1 291 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 TRAF5O00463 557 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 FFAR3O14843 346 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 CYP7B1O75881 506 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 C4BPAP04003 597 aaKnown RBP4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 ZSCAN22P10073 491 aaPredicted RBP4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 POU3F2P20265 443 aaPredicted RBP4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 JAG1P78504 1218 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 DBPQ10586 325 aaPredicted RBP4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 VMACQ2NL98 169 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 FSTL4Q6MZW2 842 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 PKN3Q6P5Z2 889 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 KRTAP19-1Q8IUB9 90 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 DTX3Q8N9I9 347 aa4.42□□□□□ -1.7
RNU6-550P-201ENST00000391057 KRTAP4-12Q9BQ66 201 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms