RNA–Protein interactions for RNA: ENST00000390917.1

RNU6-604P-201, Transcript of RNA, U6 small nuclear 604, pseudogene, humanhuman

BASIC

Gene RNU6-604P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-604P-201ENST00000390917 KLHL3Q9UH77 587 aa0.71□□□□□ -2.3
RNU6-604P-201ENST00000390917 PCDHB12Q9Y5F1 795 aa0.71□□□□□ -2.3
RNU6-604P-201ENST00000390917 A0A1W2PNU3 283 aaPredicted RBP0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 SGSM2O43147 1006 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 MOSPD3O75425 235 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 C1QL1O75973 258 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 UBOX5O94941 541 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 FBXO21O94952 628 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 ATP2B4P23634 1241 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 SEC24CP53992 1094 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 MTMR3Q13615 1198 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 TSNAXIP1Q2TAA8 658 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 SLC44A4Q53GD3 710 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 LCE3CQ5T5A8 94 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 DIEXFQ68CQ4 756 aaKnown RBP0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 TTBK2Q6IQ55 1244 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 CCDC62Q6P9F0 684 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 TEPPQ6URK8 271 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 MILR1Q7Z6M3 343 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 LCORLQ8N3X6 602 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 SEMA6DQ8NFY4 1073 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 LINC00476Q8WZB0 136 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 CAVIN3Q969G5 261 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 RPL36ALQ969Q0 106 aaKnown RBP0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 MIEF2Q96C03 454 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 SCYL1Q96KG9 808 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 CTAGE1Q96RT6 745 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 HIRIP3Q9BW71 556 aaPredicted RBP0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 SRCIN1Q9C0H9 1055 aa0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 CCDC9Q9Y3X0 531 aaKnown RBP0.7□□□□□ -2.3
RNU6-604P-201ENST00000390917 CGAP01215 116 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 HKR1P10072 659 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 HOXC13P31276 330 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 KRT2P35908 639 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 NOP2P46087 812 aaKnown RBP0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 NOVP48745 357 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 BLOC1S1P78537 153 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 SSBP2P81877 361 aaPredicted RBP0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 SMAD3P84022 425 aaKnown RBP0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 SF3B2Q13435 895 aaKnown RBP0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 LAMB3Q13751 1172 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 CHRNA2Q15822 529 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 KRTAP21-2Q3LI59 83 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 AMER1Q5JTC6 1135 aaPredicted RBP0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 EEF1DP3Q658K8 133 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 RCSD1Q6JBY9 416 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 NXPE4Q6UWF7 544 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 TMC5Q6UXY8 1006 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 GPR135Q8IZ08 494 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 DNAJC5GQ8N7S2 189 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 ZNF513Q8N8E2 541 aaPredicted RBP0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 ACRBPQ8NEB7 543 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 POM121Q96HA1 1249 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 GPR87Q9BY21 358 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 KIAA1683Q9H0B3 1180 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 SERHL2Q9H4I8 314 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 KIAA1586Q9HCI6 787 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 ALG13Q9NP73 1137 aaKnown RBP0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 GULP1Q9UBP9 304 aa0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 EPN1Q9Y6I3 576 aaPredicted RBP0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 COL11A2P13942 1736 aaPredicted RBP0.69□□□□□ -2.3
RNU6-604P-201ENST00000390917 CENPVL1A0A0U1RR11 272 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 PMS2P1A4D2B8 440 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 WIPF3A6NGB9 483 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 LRRC3CA6NJW4 275 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 CHURC1-FNTBB4DL54 471 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 SMAD6O43541 496 aaKnown RBP0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 CKBP12277 381 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 UBTFP17480 764 aaKnown RBP0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 LAG3P18627 525 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 POLD1P28340 1107 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 ETV4P43268 484 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 ZNF134P52741 427 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 RRADP55042 308 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 PROK1P58294 105 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 DDR1Q08345 913 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 EIF2B5Q13144 721 aaKnown RBP0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 KLF9Q13886 244 aaPredicted RBP0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 ETFDHQ16134 617 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 ZNF260Q3ZCT1 412 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 MTX3Q5HYI7 312 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 VASNQ6EMK4 673 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 ZNF788Q6ZQV5 615 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 HTR3DQ70Z44 454 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 SV2BQ7L1I2 683 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 ARHGEF25Q86VW2 580 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 FBXO18Q8NFZ0 1043 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 TMEM176AQ96HP8 235 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 FAM129BQ96TA1 746 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 MKRN2Q9H000 416 aaKnown RBP0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 MIR1-1HGQ9H1L0 117 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 ANLNQ9NQW6 1124 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 HSPBP1Q9NZL4 362 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 REV1Q9UBZ9 1251 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 BRPF3Q9ULD4 1205 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 ZNF652Q9Y2D9 606 aa0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 ARHGEF17Q96PE2 2063 aaPredicted RBP0.68□□□□□ -2.3
RNU6-604P-201ENST00000390917 PRR36Q9H6K5 1346 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 MYMKA6NI61 221 aa0.67□□□□□ -2.3
RNU6-604P-201ENST00000390917 GOLGA6L6A8MZA4 724 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms