RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 MAN1A2O60476 641 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 UBXN7O94888 489 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 HSP90AB1P08238 724 aaKnown RBP7.56□□□□□ -1.2
TRAV35-201ENST00000390462 NCAM1P13591 858 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 YBX3P16989 372 aaKnown RBP eCLIP7.56□□□□□ -1.2
TRAV35-201ENST00000390462 CD33P20138 364 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 LSP1P33241 339 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 FXR1P51114 621 aaKnown RBP eCLIP7.56□□□□□ -1.2
TRAV35-201ENST00000390462 ZNF445P59923 1031 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 ZBED6P86452 979 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 CYP4F3Q08477 520 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 PAK1Q13153 545 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 UBAP2LQ14157 1087 aaKnown RBP7.56□□□□□ -1.2
TRAV35-201ENST00000390462 PPP2R5DQ14738 602 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 ARHGAP44Q17R89 818 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 ANO4Q32M45 955 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 NOL9Q5SY16 702 aaKnown RBP7.56□□□□□ -1.2
TRAV35-201ENST00000390462 NBPF12Q5TAG4 269 aaPredicted RBP7.56□□□□□ -1.2
TRAV35-201ENST00000390462 IZUMO3Q5VZ72 239 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.56□□□□□ -1.2
TRAV35-201ENST00000390462 ZSCAN18Q8TBC5 510 aaPredicted RBP7.56□□□□□ -1.2
TRAV35-201ENST00000390462 SSH1Q8WYL5 1049 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 USP13Q92995 863 aaPredicted RBP7.56□□□□□ -1.2
TRAV35-201ENST00000390462 ARL8AQ96BM9 186 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 NELL2Q99435 816 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 NRSN2Q9GZP1 204 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 PICK1Q9NRD5 415 aa7.56□□□□□ -1.2
TRAV35-201ENST00000390462 SOGA1O94964 1423 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 BNIP3LO60238 219 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 GFPT2O94808 682 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 CPB1P15086 417 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 C5AR1P21730 350 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 POLD1P28340 1107 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 RAD52P43351 418 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 AFF1P51825 1210 aaKnown RBP7.55□□□□□ -1.2
TRAV35-201ENST00000390462 PHC1P78364 1004 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 PPM1JQ5JR12 505 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 SPATA1Q5VX52 437 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 NPNTQ6UXI9 565 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 USP45Q70EL2 814 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 BRINP3Q76B58 766 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 FAM35AQ86V20 835 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 MAP4K3Q8IVH8 894 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 NKAIN3Q8N8D7 197 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 KIAA1958Q8N8K9 716 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 C2orf69Q8N8R5 385 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 CYB5D2Q8WUJ1 264 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 PPP1R16BQ96T49 567 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 DPH2Q9BQC3 489 aaPredicted RBP7.55□□□□□ -1.2
TRAV35-201ENST00000390462 USP26Q9BXU7 913 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 UBE2OQ9C0C9 1292 aaKnown RBP7.55□□□□□ -1.2
TRAV35-201ENST00000390462 NOL6Q9H6R4 1146 aaKnown RBP7.55□□□□□ -1.2
TRAV35-201ENST00000390462 ATP13A2Q9NQ11 1180 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 SH3GLB2Q9NR46 395 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 FBXO10Q9UK96 956 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 GPR55Q9Y2T6 319 aaPredicted RBP7.55□□□□□ -1.2
TRAV35-201ENST00000390462 FHOD1Q9Y613 1164 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 FGD5Q6ZNL6 1462 aa7.55□□□□□ -1.2
TRAV35-201ENST00000390462 RHPN2P1A8MT19 583 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 AREL1O15033 823 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 FANCGO15287 622 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 NCK2O43639 380 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 MGEA5O60502 916 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 CTSBP07858 339 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 DHRS4L1P0CG22 281 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 PDCP20941 246 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 AGXTP21549 392 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 TECP42680 631 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 STT3AP46977 705 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 ARL4DP49703 201 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 CASP5P51878 434 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 AMPD2Q01433 879 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 TBC1D8BQ0IIM8 1120 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 C19orf57Q0VDD7 668 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 FAM209BQ5JX69 171 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 ZBTB37Q5TC79 503 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 RIPOR1Q6ZS17 1223 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 COLGALT2Q8IYK4 626 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 ZNF507Q8TCN5 953 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 SYTL5Q8TDW5 730 aaPredicted RBP7.54□□□□□ -1.2
TRAV35-201ENST00000390462 TGFBRAP1Q8WUH2 860 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 NELL1Q92832 810 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 ORAI2Q96SN7 254 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 ALG1Q9BT22 464 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 ZDHHC5Q9C0B5 715 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 SMG9Q9H0W8 520 aaKnown RBP7.54□□□□□ -1.2
TRAV35-201ENST00000390462 NUCKS1Q9H1E3 243 aaKnown RBP7.54□□□□□ -1.2
TRAV35-201ENST00000390462 KMT5AQ9NQR1 393 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 ITM2CQ9NQX7 267 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 GPR27Q9NS67 375 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 NDFIP2Q9NV92 336 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 DNAJC28Q9NX36 388 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 CWC25Q9NXE8 425 aaPredicted RBP7.54□□□□□ -1.2
TRAV35-201ENST00000390462 ARHGAP28Q9P2N2 729 aa7.54□□□□□ -1.2
TRAV35-201ENST00000390462 GDF2Q9UK05 429 aaPredicted RBP7.54□□□□□ -1.2
TRAV35-201ENST00000390462 FAM170AA1A519 330 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 SLC35F4A4IF30 521 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 CAPN8A6NHC0 703 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 SOBPA7XYQ1 873 aa7.53□□□□□ -1.2
TRAV35-201ENST00000390462 DHX16O60231 1041 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms