RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 TRIM7Q9C029 511 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 SALL4Q9UJQ4 1053 aa13.26□□□□□ -0.29
SHOX-203ENST00000381578 LRRD1A4D1F6 860 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 CYP2D6P10635 497 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 FNTAP49354 379 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 ERVK-9P63128 1117 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 IRX1P78414 480 aaPredicted RBP13.25□□□□□ -0.29
SHOX-203ENST00000381578 BIRC3Q13489 604 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 CDC37Q16543 378 aaPredicted RBP13.25□□□□□ -0.29
SHOX-203ENST00000381578 ARHGAP44Q17R89 818 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 FAM182BQ5T319 152 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 TTI2Q6NXR4 508 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 TMTC3Q6ZXV5 915 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 CRNKL1Q9BZJ0 848 aaKnown RBP13.25□□□□□ -0.29
SHOX-203ENST00000381578 TMBIM4Q9HC24 238 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 DBR1Q9UK59 544 aaKnown RBP13.25□□□□□ -0.29
SHOX-203ENST00000381578 PLAGL2Q9UPG8 496 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 NOC2LQ9Y3T9 749 aaKnown RBP13.25□□□□□ -0.29
SHOX-203ENST00000381578 DAAM1Q9Y4D1 1078 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 PCDHB13Q9Y5F0 798 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 CCDC169A6NNP5 214 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 KCNQ4P56696 695 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 PLS1Q14651 629 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 NONOQ15233 471 aaKnown RBP eCLIP13.25□□□□□ -0.29
SHOX-203ENST00000381578 LONP2Q86WA8 852 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 MYOCDQ8IZQ8 938 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 RNF10Q8N5U6 811 aaKnown RBP13.25□□□□□ -0.29
SHOX-203ENST00000381578 ZBTB38Q8NAP3 1195 aaPredicted RBP13.25□□□□□ -0.29
SHOX-203ENST00000381578 PNMA1Q8ND90 353 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 CAVIN3Q969G5 261 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 AMFRQ9UKV5 643 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 NIP7Q9Y221 180 aaKnown RBP eCLIP13.25□□□□□ -0.29
SHOX-203ENST00000381578 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
SHOX-203ENST00000381578 KCNQ2O43526 872 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 SUN1O94901 812 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 H2AFZP0C0S5 128 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 ITGA4P13612 1032 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 CRKLP46109 303 aaKnown RBP13.25□□□□□ -0.29
SHOX-203ENST00000381578 MMP14P50281 582 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 CALCOCO2Q13137 446 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 H2AFVQ71UI9 128 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 LRP10Q7Z4F1 713 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 SH3RF1Q7Z6J0 888 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 ELOA2Q8IYF1 753 aaPredicted RBP13.25□□□□□ -0.29
SHOX-203ENST00000381578 ZMYND12Q9H0C1 365 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 RNF14Q9UBS8 474 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 G3BP2Q9UN86 482 aaKnown RBP13.25□□□□□ -0.29
SHOX-203ENST00000381578 ZNF652Q9Y2D9 606 aa13.25□□□□□ -0.29
SHOX-203ENST00000381578 A0A087X0T9 212 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 SMCO2A6NFE2 343 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 CAND2O75155 1236 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 LGR5O75473 907 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 FAM228BP0C875 321 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 ITGB3BPQ13352 177 aaPredicted RBP13.24□□□□□ -0.29
SHOX-203ENST00000381578 THEMIS2Q5TEJ8 643 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 ALKBH5Q6P6C2 394 aaKnown RBP13.24□□□□□ -0.29
SHOX-203ENST00000381578 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 SPATA20Q8TB22 786 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 NEK9Q8TD19 979 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 PARD3BQ8TEW8 1205 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 OSBPL1AQ9BXW6 950 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 ADAM33Q9BZ11 813 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 TRIM9Q9C026 710 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 C6orf50Q9HD87 102 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 NKIRAS1Q9NYS0 192 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 KLHL14Q9P2G3 628 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 FLOT1O75955 427 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 SERPING1P05155 500 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 IL6STP40189 918 aaPredicted RBP13.24□□□□□ -0.29
SHOX-203ENST00000381578 FBXO41Q8TF61 875 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
SHOX-203ENST00000381578 TFCP2L1Q9NZI6 479 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 ASIC3Q9UHC3 531 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 INTUQ9ULD6 942 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 ABCC12Q96J65 1359 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 SPATA31A5Q5VU36 1347 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 SPATA31A7Q8IWB4 1347 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 SCN11AQ9UI33 1791 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 ACTN1P12814 892 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 FGFR4P22455 802 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 GBP1P32455 592 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 DDR1Q08345 913 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 ZNF844Q08AG5 666 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 DRP2Q13474 957 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 CALCRLQ16602 461 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 SPRED3Q2MJR0 410 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 PPP4R3CPQ6ZMV5 832 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 FBXL16Q8N461 479 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 RDH13Q8NBN7 331 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 RAB17Q9H0T7 212 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 ETNK1Q9HBU6 452 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 FGFR1OP2Q9NVK5 253 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 KCNG1Q9UIX4 513 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 ROBO1Q9Y6N7 1651 aa13.24□□□□□ -0.29
SHOX-203ENST00000381578 POTEMA6NI47 508 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 CETN3O15182 167 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 ELF3P78545 371 aaPredicted RBP13.23□□□□□ -0.29
SHOX-203ENST00000381578 ZBTB16Q05516 673 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 PSMD2Q13200 908 aa13.23□□□□□ -0.29
SHOX-203ENST00000381578 ADAM9Q13443 819 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms