RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 PPM1BO75688 479 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 MRE11P49959 708 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 GNL2Q13823 731 aaKnown RBP4.5□□□□□ -1.69
SMC6-202ENST00000381272 RABEP1Q15276 862 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 HLA-DQA1Q5Y7H0 255 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 ATG14Q6ZNE5 492 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 ADAT2Q7Z6V5 191 aaKnown RBP4.5□□□□□ -1.69
SMC6-202ENST00000381272 ANAPC16Q96DE5 110 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 MCOLN1Q9GZU1 580 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 KLHL25Q9H0H3 589 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 EXOC6BQ9Y2D4 811 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 CEP170BQ9Y4F5 1589 aaPredicted RBP4.5□□□□□ -1.69
SMC6-202ENST00000381272 ARHGEF10O15013 1369 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 PLEKHG1Q9ULL1 1385 aa4.5□□□□□ -1.69
SMC6-202ENST00000381272 ARID1BQ8NFD5 2236 aaPredicted RBP4.5□□□□□ -1.69
SMC6-202ENST00000381272 SSH2Q76I76 1423 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 MYOCOSA0A1B0GUC4 107 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 BAG4O95429 457 aaKnown RBP4.49□□□□□ -1.69
SMC6-202ENST00000381272 EPHX1P07099 455 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 CD3EP07766 207 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 PRKCAP17252 672 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 CCT4P50991 539 aaKnown RBP4.49□□□□□ -1.69
SMC6-202ENST00000381272 LAPTM5Q13571 262 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 PKP1Q13835 747 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 PPP2R5DQ14738 602 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 CASC1Q6TDU7 716 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 CYP2R1Q6VVX0 501 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 JAMLQ86YT9 394 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 FAM169BQ8N8A8 192 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 TMEM52Q8NDY8 209 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 ADCY4Q8NFM4 1077 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 FCRL3Q96P31 734 aaPredicted RBP4.49□□□□□ -1.69
SMC6-202ENST00000381272 EID1Q9Y6B2 187 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 SBNO1A3KN83 1393 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 PNMA6EA0A0J9YXQ4 647 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 TEX51A0A1B0GUA7 166 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 A0A1W2PQ27 194 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 A0A1W2PQ64 194 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 A0A1W2PQC6 194 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 A0A1W2PQD8 194 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 HRKO00198 91 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 ERC2O15083 957 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 FGF10O15520 208 aaPredicted RBP4.49□□□□□ -1.69
SMC6-202ENST00000381272 HMMRO75330 724 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 GNAI2P04899 355 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 MPOP05164 745 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 NCLP19338 710 aaKnown RBP4.49□□□□□ -1.69
SMC6-202ENST00000381272 PDE1AP54750 535 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 ERVFRD-1P60508 538 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 DLG4P78352 724 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 CYP4F8P98187 520 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 KCNA10Q16322 511 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 SKOR2Q2VWA4 1001 aaPredicted RBP4.49□□□□□ -1.69
SMC6-202ENST00000381272 OLFML2BQ68BL8 750 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 KIAA1211LQ6NV74 962 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 VHLLQ6RSH7 139 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 ZGPATQ8N5A5 531 aaKnown RBP4.49□□□□□ -1.69
SMC6-202ENST00000381272 NUP43Q8NFH3 380 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 ZSCAN18Q8TBC5 510 aaPredicted RBP4.49□□□□□ -1.69
SMC6-202ENST00000381272 KLHL6Q8WZ60 621 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 CHAMP1Q96JM3 812 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 FGD4Q96M96 766 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 JMJD8Q96S16 334 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 STK31Q9BXU1 1019 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 KRTAP17-1Q9BYP8 105 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 CD320Q9NPF0 282 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 ACSL6Q9UKU0 697 aa4.49□□□□□ -1.69
SMC6-202ENST00000381272 TTC21AQ8NDW8 1320 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 PIK3C2AO00443 1686 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 FLT4P35916 1363 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 DIP2AQ14689 1571 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 NPIPB6E9PJ23 425 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 ABLIM1O14639 778 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 TBC1D8O95759 1140 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 SSBP05455 408 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMC6-202ENST00000381272 IFNGR1P15260 489 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 SDHBP21912 280 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 HOXC9P31274 260 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 KIR3DS1Q14943 382 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 CILP2Q8IUL8 1156 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 LRRC56Q8IYG6 542 aaPredicted RBP4.48□□□□□ -1.69
SMC6-202ENST00000381272 IL17REQ8NFR9 667 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 RILPL2Q969X0 211 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 RCC1LQ96I51 464 aaKnown RBP4.48□□□□□ -1.69
SMC6-202ENST00000381272 IMPACTQ9P2X3 320 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 SMG5Q9UPR3 1016 aaKnown RBP4.48□□□□□ -1.69
SMC6-202ENST00000381272 SUGT1Q9Y2Z0 365 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 LRRFIP2Q9Y608 721 aaKnown RBP4.48□□□□□ -1.69
SMC6-202ENST00000381272 DDX49Q9Y6V7 483 aaKnown RBP4.48□□□□□ -1.69
SMC6-202ENST00000381272 IGSF1Q8N6C5 1336 aa4.48□□□□□ -1.69
SMC6-202ENST00000381272 XRN1Q8IZH2 1706 aaKnown RBP4.48□□□□□ -1.69
SMC6-202ENST00000381272 FAM208AQ9UK61 1670 aaKnown RBP4.47□□□□□ -1.69
SMC6-202ENST00000381272 ANKRD34BA5PLL1 514 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 GOLGA6L22H0YM25 854 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 REC8O95072 547 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 MAP4K4O95819 1239 aaPredicted RBP4.47□□□□□ -1.69
SMC6-202ENST00000381272 PTMSP20962 102 aa4.47□□□□□ -1.69
SMC6-202ENST00000381272 CFPP27918 469 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms