RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 STAT2P52630 851 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 GNGT1P63211 74 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 SPATA1Q5VX52 437 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 DCAF15Q66K64 600 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 SCYL3Q8IZE3 742 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 GJA10Q969M2 543 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 CDCA5Q96FF9 252 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 P2RX7Q99572 595 aaKnown RBP12.83□□□□□ -0.36
PITRM1-202ENST00000380989 LRRC1Q9BTT6 524 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 TANGO6Q9C0B7 1094 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 ERLIN2O94905 339 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 NDUFA10O95299 355 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
PITRM1-202ENST00000380989 HOXA13P31271 388 aaPredicted RBP12.83□□□□□ -0.36
PITRM1-202ENST00000380989 DNAAF5Q86Y56 855 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 JPH2Q9BR39 696 aaPredicted RBP12.83□□□□□ -0.36
PITRM1-202ENST00000380989 ZMYND12Q9H0C1 365 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 BRMS1Q9HCU9 246 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 PICK1Q9NRD5 415 aa12.83□□□□□ -0.36
PITRM1-202ENST00000380989 EPN1Q9Y6I3 576 aaPredicted RBP12.83□□□□□ -0.36
PITRM1-202ENST00000380989 GOLGA6CA6NDK9 693 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 GOLGA6DP0CG33 693 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 MMP14P50281 582 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 SEC24CP53992 1094 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 USP14P54578 494 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 WDR59Q6PJI9 974 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 CPXCR1Q8N123 301 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 PPM1EQ8WY54 764 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 JAKMIP2Q96AA8 810 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 ELP3Q9H9T3 547 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 NMRK2Q9NPI5 230 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 GOLGA6AQ9NYA3 693 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 HNRNPH1P31943 449 aaKnown RBP12.82□□□□□ -0.36
PITRM1-202ENST00000380989 DEF6Q9H4E7 631 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 MLXIPQ9HAP2 919 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 FRMD3A2A2Y4 597 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 VCAM1P19320 739 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 MKRN3Q13064 507 aaKnown RBP12.82□□□□□ -0.36
PITRM1-202ENST00000380989 CDKAL1Q5VV42 579 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.82□□□□□ -0.36
PITRM1-202ENST00000380989 MS4A14Q96JA4 679 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 AGBL1Q96MI9 1066 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 CRACR2AQ9BSW2 395 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 HOMER2Q9NSB8 354 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 ZNF112Q9UJU3 913 aa12.82□□□□□ -0.36
PITRM1-202ENST00000380989 CCDC194A0A1B0GVG4 234 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 ATP2C2O75185 946 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 GUCY1A3Q02108 690 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 LETM2Q2VYF4 491 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 SUPT20HL1Q3ZLR7 823 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 TTC38Q5R3I4 469 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 MTMR8Q96EF0 704 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 SNCAIPQ9Y6H5 919 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 CAPN7Q9Y6W3 813 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 COPB1P53618 953 aaKnown RBP12.81□□□□□ -0.36
PITRM1-202ENST00000380989 RILPL1Q5EBL4 403 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 NT5DC1Q5TFE4 455 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 TRAPPC11Q7Z392 1133 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 CENPHQ9H3R5 247 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 CAPN6Q9Y6Q1 641 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 BRCA2P51587 3418 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 FAM237AA0A1B0GTK4 181 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 B4DLN1 442 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 KCNJ18B7U540 433 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 PTGDRQ13258 359 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 KCNJ12Q14500 433 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 NFRKBQ6P4R8 1299 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 USP50Q70EL3 339 aaPredicted RBP12.81□□□□□ -0.36
PITRM1-202ENST00000380989 TBCKQ8TEA7 893 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 OTUD5Q96G74 571 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 RPAP3Q9H6T3 665 aaPredicted RBP12.81□□□□□ -0.36
PITRM1-202ENST00000380989 SH3GLB2Q9NR46 395 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 SAR1BQ9Y6B6 198 aa12.81□□□□□ -0.36
PITRM1-202ENST00000380989 GRIN2DO15399 1336 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 GOLGA6BA6NDN3 693 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 OPLAHO14841 1288 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 EDIL3O43854 480 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 FLOT1O75955 427 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 PRCPP42785 496 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 ADCY7P51828 1080 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 UBXN2AP68543 259 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 ACTN3Q08043 901 aaPredicted RBP12.8□□□□□ -0.36
PITRM1-202ENST00000380989 IL17AQ16552 155 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 REXO1Q8N1G1 1221 aaKnown RBP12.8□□□□□ -0.36
PITRM1-202ENST00000380989 ZNF280CQ8ND82 737 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 NELFBQ8WX92 580 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 TMEM60Q9H2L4 133 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 PSTPIP2Q9H939 334 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 C6orf50Q9HD87 102 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 IDEP14735 1019 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 CALML3P27482 149 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 SPRED3Q2MJR0 410 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 TTMPQ5BVD1 217 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 IRF2BP1Q8IU81 584 aa12.8□□□□□ -0.36
PITRM1-202ENST00000380989 CCNT1O60563 726 aaKnown RBP12.79□□□□□ -0.36
PITRM1-202ENST00000380989 SMARCA1P28370 1054 aa12.79□□□□□ -0.36
PITRM1-202ENST00000380989 BACE1P56817 501 aa12.79□□□□□ -0.36
PITRM1-202ENST00000380989 ENOX2Q16206 610 aaKnown RBP12.79□□□□□ -0.36
PITRM1-202ENST00000380989 KIAA1328Q86T90 577 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms