RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 VCPKMTQ9H867 229 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 PRR12Q9ULL5 1215 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 SLIT3O75094 1523 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 LRRN2O75325 713 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 MXI1P50539 228 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 DNAJC21Q5F1R6 531 aaKnown RBP13.38□□□□□ -0.27
GABPB1-203ENST00000380877 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 JMJD4Q9H9V9 463 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 IL1R1P14778 569 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 SMARCA1P28370 1054 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 PIK3CAP42336 1068 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 MFAP3P55082 362 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 MTMR2Q13614 643 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 PDIA5Q14554 519 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 SEC23AQ15436 765 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 PADI6Q6TGC4 694 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 ARFGAP2Q8N6H7 521 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 AKT3Q9Y243 479 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 LGALS16A8MUM7 142 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 MFAP3LO75121 409 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 DDR1Q08345 913 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 GPR161Q8N6U8 529 aaKnown RBP13.38□□□□□ -0.27
GABPB1-203ENST00000380877 TTC16Q8NEE8 873 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 LPAR1Q92633 364 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 ZDHHC15Q96MV8 337 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 OGFRQ9NZT2 677 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 KIF13AQ9H1H9 1805 aa13.38□□□□□ -0.27
GABPB1-203ENST00000380877 GMPSP49915 693 aaPredicted RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 YARSP54577 528 aaKnown RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 PTK2Q05397 1052 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 FAM133AQ8N9E0 248 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 NEK9Q8TD19 979 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 IPO4Q8TEX9 1081 aaKnown RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 ASIC3Q9UHC3 531 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 SCAF8Q9UPN6 1271 aaKnown RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 PROM2Q8N271 834 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 GUF1Q8N442 669 aaKnown RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 ATRIPQ8WXE1 791 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 PRMT6Q96LA8 375 aaPredicted RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 NRXN3Q9Y4C0 1643 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 WDR46O15213 610 aaKnown RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 LMNB1P20700 586 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 PAK2Q13177 524 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 DHX40Q8IX18 779 aaKnown RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 EXOC8Q8IYI6 725 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 CCDC105Q8IYK2 499 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 MMS19Q96T76 1030 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 TRIM9Q9C026 710 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 IQCGQ9H095 443 aaKnown RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 ACAD9Q9H845 621 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 MYOZ2Q9NPC6 264 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 MAD2L2Q9UI95 211 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 NDUFA10O95299 355 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 P4HBP07237 508 aaKnown RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 CAPN2P17655 700 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 ABCD1P33897 745 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 EIF4A3P38919 411 aaKnown RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 QARSP47897 775 aaKnown RBP13.37□□□□□ -0.27
GABPB1-203ENST00000380877 KIF22Q14807 665 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 CLUL1Q15846 466 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 CCDC170Q8IYT3 715 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 RNF169Q8NCN4 708 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 CDC23Q9UJX2 597 aa13.37□□□□□ -0.27
GABPB1-203ENST00000380877 EFCAB8A8MWE9 144 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 K7ERI5 159 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 BPIFB4P59827 614 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 CYP27A1Q02318 531 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 LONRF2Q1L5Z9 754 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 LRP10Q7Z4F1 713 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 ENC1O14682 589 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 EHHADHQ08426 723 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 SEMA3FQ13275 785 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 TAF12Q16514 161 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 ANGEL2Q5VTE6 544 aaKnown RBP13.36□□□□□ -0.27
GABPB1-203ENST00000380877 MCPH1Q8NEM0 835 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 LRRC45Q96CN5 670 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 SALL1Q9NSC2 1324 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 PALM3A6NDB9 673 aaPredicted RBP13.36□□□□□ -0.27
GABPB1-203ENST00000380877 WTIPA6NIX2 430 aaPredicted RBP13.36□□□□□ -0.27
GABPB1-203ENST00000380877 MARK3P27448 753 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 EIF2AK1Q9BQI3 630 aaKnown RBP13.36□□□□□ -0.27
GABPB1-203ENST00000380877 SPTLC3Q9NUV7 552 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 CALCOCO1Q9P1Z2 691 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 ESYT2A0FGR8 921 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 NSFP46459 744 aaKnown RBP13.36□□□□□ -0.27
GABPB1-203ENST00000380877 LACTBP83111 547 aaPredicted RBP13.36□□□□□ -0.27
GABPB1-203ENST00000380877 KCNB1Q14721 858 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 SND1Q7KZF4 910 aaKnown RBP eCLIP13.36□□□□□ -0.27
GABPB1-203ENST00000380877 PAIP2Q9BPZ3 127 aaKnown RBP13.36□□□□□ -0.27
GABPB1-203ENST00000380877 LXNQ9BS40 222 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 BEGAINQ9BUH8 593 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 TMEM60Q9H2L4 133 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 PLEKHA4Q9H4M7 779 aa13.36□□□□□ -0.27
GABPB1-203ENST00000380877 NHEJ1Q9H9Q4 299 aaPredicted RBP13.36□□□□□ -0.27
GABPB1-203ENST00000380877 GOLGA8IPA6NC78 632 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 GOLGA8JA6NMD2 632 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 GFPT2O94808 682 aa13.35□□□□□ -0.27
GABPB1-203ENST00000380877 HOXA10P31260 410 aaPredicted RBP13.35□□□□□ -0.27
GABPB1-203ENST00000380877 SAMD7Q7Z3H4 446 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms