RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 GPR161Q8N6U8 529 aaKnown RBP13.95□□□□□ -0.18
VPS16-202ENST00000380445 GLIS3Q8NEA6 775 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 TANGO6Q9C0B7 1094 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 ZHX3Q9H4I2 956 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 TUFT1Q9NNX1 390 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 TBC1D7Q9P0N9 293 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 FAM184BQ9ULE4 1060 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 IGLV3-22A0A075B6J6 115 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 A0A0U1RQJ8 604 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 PABPC4Q13310 644 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS16-202ENST00000380445 GIT2Q14161 759 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 SCFD1Q8WVM8 642 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 ATRIPQ8WXE1 791 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 GOLGA1Q92805 767 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 CCDC42Q96M95 316 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 EIF2AK1Q9BQI3 630 aaKnown RBP13.95□□□□□ -0.18
VPS16-202ENST00000380445 MYOZ2Q9NPC6 264 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 GINM1Q9NU53 330 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 KIF13BQ9NQT8 1826 aa13.95□□□□□ -0.18
VPS16-202ENST00000380445 EYA4O95677 639 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 SETQ01105 290 aaPredicted RBP13.94□□□□□ -0.18
VPS16-202ENST00000380445 NEK11Q8NG66 645 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 NUCKS1Q9H1E3 243 aaKnown RBP13.94□□□□□ -0.18
VPS16-202ENST00000380445 KCTD10Q9H3F6 313 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 REXO2Q9Y3B8 237 aaKnown RBP13.94□□□□□ -0.18
VPS16-202ENST00000380445 NPHP3-ACAD11A0A0J9YXS1 232 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 CETN3O15182 167 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 SPA17Q15506 151 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 ZYXQ15942 572 aaKnown RBP13.94□□□□□ -0.18
VPS16-202ENST00000380445 CCDC122Q5T0U0 273 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 LRCH2Q5VUJ6 765 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 SRGAP1Q7Z6B7 1085 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 CYP2W1Q8TAV3 490 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 RABGGTAQ92696 567 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 TSGA10Q9BZW7 698 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 DEFB129Q9H1M3 183 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 TAOK3Q9H2K8 898 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 FAM207AQ9NSI2 230 aaPredicted RBP13.94□□□□□ -0.18
VPS16-202ENST00000380445 GUCA1BQ9UMX6 200 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 MEIS1O00470 390 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 PSMC6P62333 389 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 RAD51AP2Q09MP3 1159 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 PPP2R5CQ13362 524 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 CEP55Q53EZ4 464 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 DALRD3Q5D0E6 543 aaKnown RBP13.94□□□□□ -0.18
VPS16-202ENST00000380445 RSRC2Q7L4I2 434 aaKnown RBP13.94□□□□□ -0.18
VPS16-202ENST00000380445 OTOP1Q7RTM1 612 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 LDHDQ86WU2 507 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 NELFCDQ8IXH7 590 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 ZC3H3Q8IXZ2 948 aaKnown RBP13.94□□□□□ -0.18
VPS16-202ENST00000380445 WDR11Q9BZH6 1224 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 PGAP2Q9UHJ9 254 aa13.94□□□□□ -0.18
VPS16-202ENST00000380445 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.94□□□□□ -0.188e-6■■■■□ 20.4
VPS16-202ENST00000380445 TBCAO75347 108 aaKnown RBP13.93□□□□□ -0.18
VPS16-202ENST00000380445 PSMD10O75832 226 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 TAL1P17542 331 aaPredicted RBP13.93□□□□□ -0.18
VPS16-202ENST00000380445 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
VPS16-202ENST00000380445 ADAM9Q13443 819 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 WHAMMP3Q1A5X7 153 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 NBPF9Q3BBW0 867 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 CACNA2D4Q7Z3S7 1137 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 KRT26Q7Z3Y9 468 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 LPAR1Q92633 364 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 SLC5A5Q92911 643 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 JAKMIP2Q96AA8 810 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 REEP2Q9BRK0 252 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 BHMT2Q9H2M3 363 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 CALUO43852 315 aaPredicted RBP13.93□□□□□ -0.18
VPS16-202ENST00000380445 GAP43P17677 238 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 RPS12P25398 132 aaKnown RBP13.93□□□□□ -0.18
VPS16-202ENST00000380445 CHMP4BP1P59074 171 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 HERVK_113P62684 666 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 CYP4A11Q02928 519 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 KNOP1Q1ED39 458 aaKnown RBP13.93□□□□□ -0.18
VPS16-202ENST00000380445 TXLNBQ8N3L3 684 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 HSD17B14Q9BPX1 270 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 TRAF3IP3Q9Y228 551 aa13.93□□□□□ -0.18
VPS16-202ENST00000380445 WDR46O15213 610 aaKnown RBP13.92□□□□□ -0.18
VPS16-202ENST00000380445 NKRFO15226 690 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS16-202ENST00000380445 USO1O60763 962 aaKnown RBP13.92□□□□□ -0.18
VPS16-202ENST00000380445 GAS7O60861 476 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 ICAM1P05362 532 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 PTGER2P43116 358 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 CLCN6P51797 869 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 BMS1Q14692 1282 aaKnown RBP13.92□□□□□ -0.18
VPS16-202ENST00000380445 TRIM59Q8IWR1 403 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 PRPF38AQ8NAV1 312 aaKnown RBP13.92□□□□□ -0.18
VPS16-202ENST00000380445 TBC1D5Q92609 795 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 WDR18Q9BV38 432 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 DEF6Q9H4E7 631 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 PDXKO00764 312 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 EPS15P42566 896 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 PRELPP51888 382 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 KIF5AQ12840 1032 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 RASA3Q14644 834 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 TERF2Q15554 542 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 TEX35Q5T0J7 233 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 TMCO3Q6UWJ1 677 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 SFR1Q86XK3 245 aa13.92□□□□□ -0.18
VPS16-202ENST00000380445 MCF2L2Q86YR7 1114 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms