RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 SLC30A10Q6XR72 485 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 GPBP1Q86WP2 473 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 ADGRF4Q8IZF3 695 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 SCFD1Q8WVM8 642 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 ARHGEF1Q92888 912 aaKnown RBP9.59□□□□□ -0.87
TRIM6-203ENST00000380107 RIOX1Q9H6W3 641 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 PCDHA12Q9UN75 941 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 PLAAQ9Y263 795 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 SSU72P8A0A1W2PR75 194 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 USP17L10C9JJH3 530 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 CEP104O60308 925 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 KRT18P05783 430 aaKnown RBP9.59□□□□□ -0.87
TRIM6-203ENST00000380107 INPP5BP32019 993 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 LSP1P33241 339 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 FLT3P36888 993 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 RHBDL3P58872 404 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 GSTO1P78417 241 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 C1QBPQ07021 282 aaKnown RBP9.59□□□□□ -0.87
TRIM6-203ENST00000380107 KCNH2Q12809 1159 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 SLC18A3Q16572 532 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 MEI1Q5TIA1 1274 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 ZNF804AQ7Z570 1209 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 INPP4AQ96PE3 977 aaPredicted RBP9.59□□□□□ -0.87
TRIM6-203ENST00000380107 MXD3Q9BW11 206 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 NEUROG2Q9H2A3 272 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 JMJD4Q9H9V9 463 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 LRRC4CQ9HCJ2 640 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 PPANQ9NQ55 473 aaKnown RBP9.59□□□□□ -0.87
TRIM6-203ENST00000380107 BCCIPQ9P287 314 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRIM6-203ENST00000380107 AJAP1Q9UKB5 411 aaPredicted RBP9.59□□□□□ -0.87
TRIM6-203ENST00000380107 CAPN7Q9Y6W3 813 aa9.59□□□□□ -0.87
TRIM6-203ENST00000380107 WNK3Q9BYP7 1800 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 COL5A3P25940 1745 aaPredicted RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 MPHOSPH10O00566 681 aaKnown RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 PLA2G4BP0C869 781 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 NR1D1P20393 614 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 PSMC6P62333 389 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 ERVK-9P63128 1117 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 HDLBPQ00341 1268 aaKnown RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 PAK2Q13177 524 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 SEMA3FQ13275 785 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 DCAF17Q5H9S7 520 aaPredicted RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 ZNF571Q7Z3V5 609 aaPredicted RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 TRIM59Q8IWR1 403 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 IPO4Q8TEX9 1081 aaKnown RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 RAB34Q9BZG1 259 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 DDX47Q9H0S4 455 aaKnown RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 RNF39Q9H2S5 420 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 CD209Q9NNX6 404 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 RIC8AQ9NPQ8 531 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 MTMR4Q9NYA4 1195 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 TNRC6CQ9HCJ0 1690 aaKnown RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 FAM196BA6NMK8 535 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 TMCO5BA8MYB1 307 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 RBAK-RBAKDNI3L0D1 243 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 EPB41P11171 864 aaKnown RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 ITGA4P13612 1032 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 NR2F2P24468 414 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 ASIC2Q16515 512 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 TCERG1LQ5VWI1 586 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 NAA35Q5VZE5 725 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 CHADLQ6NUI6 762 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 KCNV1Q6PIU1 500 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 GBP6Q6ZN66 633 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 ADAT2Q7Z6V5 191 aaKnown RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 RNF10Q8N5U6 811 aaKnown RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 USP38Q8NB14 1042 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 CNKSR2Q8WXI2 1034 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 ZNF287Q9HBT7 754 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 EMILIN3Q9NT22 766 aa9.58□□□□□ -0.88
TRIM6-203ENST00000380107 RTCBQ9Y3I0 505 aaKnown RBP9.58□□□□□ -0.88
TRIM6-203ENST00000380107 GPR75-ASB3A0A0A6YYF3 556 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 RIMBP2O15034 1052 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 MED24O75448 989 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 LDHCP07864 332 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 TMOD1P28289 359 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 RFC4P35249 363 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 SKOR1P84550 965 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 KCNA1Q09470 495 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 PDIA5Q14554 519 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 RNF187Q5TA31 235 aaPredicted RBP9.57□□□□□ -0.88
TRIM6-203ENST00000380107 RBM46Q8TBY0 533 aaKnown RBP9.57□□□□□ -0.88
TRIM6-203ENST00000380107 CELF4Q9BZC1 486 aaKnown RBP9.57□□□□□ -0.88
TRIM6-203ENST00000380107 TRIM31Q9BZY9 425 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 DDX4Q9NQI0 724 aaKnown RBP9.57□□□□□ -0.88
TRIM6-203ENST00000380107 PCDHA2Q9Y5H9 948 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 SFI1A8K8P3 1242 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 DCDC2CA8MYV0 355 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 RSPH10B2B2RC85 870 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 E7EVH7 732 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 CLIC2O15247 247 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 RSPH10BP0C881 870 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 CYP11B2P19099 503 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 IBSPP21815 317 aaPredicted RBP9.57□□□□□ -0.88
TRIM6-203ENST00000380107 HNRNPH1P31943 449 aaKnown RBP9.57□□□□□ -0.88
TRIM6-203ENST00000380107 COPB2P35606 906 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 CASP4P49662 377 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 CYP4A11Q02928 519 aa9.57□□□□□ -0.88
TRIM6-203ENST00000380107 PABPC4Q13310 644 aaKnown RBP eCLIP9.57□□□□□ -0.88
TRIM6-203ENST00000380107 GRAPQ13588 217 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms