RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 GOLPH3Q9H4A6 298 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 STK17AQ9UEE5 414 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 WTIPA6NIX2 430 aaPredicted RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 PGRMC1O00264 195 aaKnown RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 EEF2P13639 858 aaKnown RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 CARSP49589 748 aaKnown RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 EVX2Q03828 476 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 RIC8AQ9NPQ8 531 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 PRPF6O94906 941 aaKnown RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 SYF2O95926 243 aaKnown RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 AFPP02771 609 aaKnown RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 GTF2IP78347 998 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 IL17AQ16552 155 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 FAM133BQ5BKY9 247 aaKnown RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 GKAP1Q5VSY0 366 aaPredicted RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 UBL4BQ8N7F7 174 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 ARL8AQ96BM9 186 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 NAP1L3Q99457 506 aaPredicted RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 KDM3BQ7LBC6 1761 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 SFI1A8K8P3 1242 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 MYO1FO00160 1098 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 PLA2G4BP0C869 781 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 FGFR2P21802 821 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 LRRC63Q05C16 580 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 DGKHQ86XP1 1220 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 WHAMMQ8TF30 809 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 DDX47Q9H0S4 455 aaKnown RBP12.43□□□□□ -0.42
SMAD9-202ENST00000379826 TACC3Q9Y6A5 838 aa12.43□□□□□ -0.42
SMAD9-202ENST00000379826 H2AFZP0C0S5 128 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 KRT5P13647 590 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 STAT3P40763 770 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 PLTPP55058 493 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 ACTN3Q08043 901 aaPredicted RBP12.42□□□□□ -0.42
SMAD9-202ENST00000379826 H2AFVQ71UI9 128 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 RSRC1Q96IZ7 334 aaKnown RBP12.42□□□□□ -0.42
SMAD9-202ENST00000379826 RAB17Q9H0T7 212 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 ORC4O43929 436 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 MMP10P09238 476 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 CLTAP09496 248 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 STAT1P42224 750 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 TACO1Q9BSH4 297 aaKnown RBP12.42□□□□□ -0.42
SMAD9-202ENST00000379826 GCNT4Q9P109 453 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 STXBP3O00186 592 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 KCNQ2O43526 872 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 MYBL2P10244 700 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 VEGFAP15692 232 aaPredicted RBP12.42□□□□□ -0.42
SMAD9-202ENST00000379826 BICD1Q96G01 975 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 LOC102724159A0A0B4J2E5 919 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 MYMKA6NI61 221 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 CNGA1P29973 690 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 PWP2Q15269 919 aaKnown RBP12.42□□□□□ -0.42
SMAD9-202ENST00000379826 VPS72Q15906 364 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 TBC1D10BQ4KMP7 808 aaPredicted RBP12.42□□□□□ -0.42
SMAD9-202ENST00000379826 PAPD7Q5XG87 772 aaKnown RBP12.42□□□□□ -0.42
SMAD9-202ENST00000379826 RNPC3Q96LT9 517 aaKnown RBP12.42□□□□□ -0.42
SMAD9-202ENST00000379826 NAP1L4Q99733 375 aaKnown RBP12.42□□□□□ -0.42
SMAD9-202ENST00000379826 ATP6V0A2Q9Y487 856 aa12.42□□□□□ -0.42
SMAD9-202ENST00000379826 EXOC3O60645 756 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 LPXNO60711 386 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 SEC24CP53992 1094 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 MAD2L2Q9UI95 211 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 MTUS1Q9ULD2 1270 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 HMGB1P1B2RPK0 211 aaPredicted RBP12.41□□□□□ -0.42
SMAD9-202ENST00000379826 LRRN2O75325 713 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 ACTN1P12814 892 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 CCDC174Q6PII3 467 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 DNAAF5Q86Y56 855 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 VGLL2Q8N8G2 317 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 ATP6V1G3Q96LB4 118 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 PLCB1Q9NQ66 1216 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 UBXN2AP68543 259 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 TBC1D9BQ66K14 1250 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 FAM53CQ9NYF3 392 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 ASIC3Q9UHC3 531 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 CHD2O14647 1828 aaKnown RBP12.41□□□□□ -0.42
SMAD9-202ENST00000379826 RCCD1A6NED2 376 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 GLE1Q53GS7 698 aaKnown RBP12.41□□□□□ -0.42
SMAD9-202ENST00000379826 SH3RF1Q7Z6J0 888 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 MARCH10Q8NA82 808 aaPredicted RBP12.41□□□□□ -0.42
SMAD9-202ENST00000379826 CEP95Q96GE4 821 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 USP40Q9NVE5 1235 aa12.41□□□□□ -0.42
SMAD9-202ENST00000379826 FGGP02679 453 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 ZNF473Q8WTR7 871 aaKnown RBP12.4□□□□□ -0.42
SMAD9-202ENST00000379826 EHMT1Q9H9B1 1298 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 CCDC85CA6NKD9 419 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 POTECB2RU33 542 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 MAGOHP61326 146 aaKnown RBP12.4□□□□□ -0.42
SMAD9-202ENST00000379826 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
SMAD9-202ENST00000379826 DLGAP5Q15398 846 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 ZYXQ15942 572 aaKnown RBP12.4□□□□□ -0.42
SMAD9-202ENST00000379826 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 DDX42Q86XP3 938 aaKnown RBP eCLIP12.4□□□□□ -0.42
SMAD9-202ENST00000379826 MAGOHBQ96A72 148 aaKnown RBP12.4□□□□□ -0.42
SMAD9-202ENST00000379826 DMGDHQ9UI17 866 aaKnown RBP12.4□□□□□ -0.42
SMAD9-202ENST00000379826 ANAPC4Q9UJX5 808 aa12.4□□□□□ -0.42
SMAD9-202ENST00000379826 CTNND1O60716 968 aaKnown RBP12.4□□□□□ -0.42
SMAD9-202ENST00000379826 OTUD6AQ7L8S5 288 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms