RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 ZNF268Q14587 947 aaPredicted RBP11.87□□□□□ -0.51
USP6NL-202ENST00000379237 TBC1D25Q3MII6 688 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 RPS6KL1Q9Y6S9 549 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 VHLP40337 213 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 ERVK-9P63128 1117 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 ERMARDQ5T6L9 678 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 CNNM4Q6P4Q7 775 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 USP38Q8NB14 1042 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 CNKSR1Q969H4 720 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 TLR10Q9BXR5 811 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 CELF4Q9BZC1 486 aaKnown RBP11.87□□□□□ -0.51
USP6NL-202ENST00000379237 RNPEPL1Q9HAU8 725 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 METTL5Q9NRN9 209 aaKnown RBP11.87□□□□□ -0.51
USP6NL-202ENST00000379237 PDP2Q9P2J9 529 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 ACSL3O95573 720 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 IFNAR1P17181 557 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 ATP6V1C1P21283 382 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 PEX5P50542 639 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 IL9RQ01113 521 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 WDR59Q6PJI9 974 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 AGGF1Q8N302 714 aaeCLIP11.87□□□□□ -0.51
USP6NL-202ENST00000379237 TRIM51Q9BSJ1 452 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 PNMA3Q9UL41 463 aa11.87□□□□□ -0.51
USP6NL-202ENST00000379237 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 DCDC2CA8MYV0 355 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 FGGP02679 453 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 SP100P23497 879 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-202ENST00000379237 DR1Q01658 176 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 SFSWAPQ12872 951 aaKnown RBP11.86□□□□□ -0.51
USP6NL-202ENST00000379237 ARHGEF18Q6ZSZ5 1173 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 MREGQ8N565 214 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 STK32AQ8WU08 396 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 GOLPH3Q9H4A6 298 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 ADAM22Q9P0K1 906 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 HAO1Q9UJM8 370 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 NOC2LQ9Y3T9 749 aaKnown RBP11.86□□□□□ -0.51
USP6NL-202ENST00000379237 KIF1BO60333 1816 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 FAM205CA6NFA0 338 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 MAGEA8P43361 318 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 EPHA10Q5JZY3 1008 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 IFIT1BQ5T764 474 aaKnown RBP11.86□□□□□ -0.51
USP6NL-202ENST00000379237 MTHFD1LQ6UB35 978 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 DYMQ7RTS9 669 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 OLFM3Q96PB7 478 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 AGXT2Q9BYV1 514 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 ARHGEF10LQ9HCE6 1279 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 ASIC3Q9UHC3 531 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 NEDD4P46934 1319 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 CA8P35219 290 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 CDR2Q01850 454 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 PTPN12Q05209 780 aaKnown RBP11.86□□□□□ -0.51
USP6NL-202ENST00000379237 CYB5R4Q7L1T6 521 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 SYCE1Q8N0S2 351 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 FAM133AQ8N9E0 248 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 MORC4Q8TE76 937 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 DHTKD1Q96HY7 919 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-202ENST00000379237 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-202ENST00000379237 PUS7LQ9H0K6 701 aaKnown RBP11.86□□□□□ -0.51
USP6NL-202ENST00000379237 DMAP1Q9NPF5 467 aaPredicted RBP11.86□□□□□ -0.51
USP6NL-202ENST00000379237 WDR35Q9P2L0 1181 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 ATXN10Q9UBB4 475 aa11.86□□□□□ -0.51
USP6NL-202ENST00000379237 NPTXRO95502 500 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 MYL1P05976 194 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 KRT15P19012 456 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 CCNE1P24864 410 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 INHBEP58166 350 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 IRGCQ6NXR0 463 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 MTMR8Q96EF0 704 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 MED15Q96RN5 788 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 PHACTR1Q9C0D0 580 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 UBA5Q9GZZ9 404 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 LRCH1Q9Y2L9 728 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 PTPN22Q9Y2R2 807 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.85□□□□□ -0.51
USP6NL-202ENST00000379237 ETS2P15036 469 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 TNFRSF8P28908 595 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 RCN1Q15293 331 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 FANCBQ8NB91 859 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 RBBP8NLQ8NC74 664 aaPredicted RBP11.85□□□□□ -0.51
USP6NL-202ENST00000379237 DNAJC17Q9NVM6 304 aaKnown RBP11.85□□□□□ -0.51
USP6NL-202ENST00000379237 PARP2Q9UGN5 583 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 HNRNPRO43390 633 aaKnown RBP11.85□□□□□ -0.51
USP6NL-202ENST00000379237 OATP04181 439 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 ZFXP17010 805 aaPredicted RBP11.85□□□□□ -0.51
USP6NL-202ENST00000379237 GNAT2P19087 354 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 ABCB4P21439 1286 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 POLD1P28340 1107 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 PPP1R2P41236 205 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 ANTXR2P58335 489 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 FBXO31Q5XUX0 539 aaPredicted RBP11.85□□□□□ -0.51
USP6NL-202ENST00000379237 ZMAT2Q96NC0 199 aaKnown RBP11.85□□□□□ -0.51
USP6NL-202ENST00000379237 TMEM237Q96Q45 408 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 LRP2BPQ9P2M1 347 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 AGTP01019 485 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 BRAFP15056 766 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 FGFR4P22455 802 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 PTDSS1P48651 473 aaKnown RBP11.85□□□□□ -0.51
USP6NL-202ENST00000379237 ZNF654Q8IZM8 581 aa11.85□□□□□ -0.51
USP6NL-202ENST00000379237 NMD3Q96D46 503 aaKnown RBP11.85□□□□□ -0.51
USP6NL-202ENST00000379237 AGAP1Q9UPQ3 857 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms