RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 CCDC122Q5T0U0 273 aa23.71■■□□□ 1.39
CNTFR-202ENST00000378980 KCTD17Q8N5Z5 321 aa23.71■■□□□ 1.39
CNTFR-202ENST00000378980 TANGO6Q9C0B7 1094 aa23.71■■□□□ 1.39
CNTFR-202ENST00000378980 ASNSP08243 561 aa23.7■■□□□ 1.38
CNTFR-202ENST00000378980 CHMP4BP1P59074 171 aa23.7■■□□□ 1.38
CNTFR-202ENST00000378980 EDRF1Q3B7T1 1238 aa23.7■■□□□ 1.38
CNTFR-202ENST00000378980 NBPF9Q3BBW0 867 aa23.7■■□□□ 1.38
CNTFR-202ENST00000378980 JAKMIP2Q96AA8 810 aa23.7■■□□□ 1.38
CNTFR-202ENST00000378980 FER1L6Q2WGJ9 1857 aa23.7■■□□□ 1.38
CNTFR-202ENST00000378980 EYA4O95677 639 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 CASP5P51878 434 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 AMPD2Q01433 879 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 TRIM59Q8IWR1 403 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 EDEM3Q9BZQ6 932 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 EHMT1Q9H9B1 1298 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 FBXO28Q9NVF7 368 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 TFR2Q9UP52 801 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 KRT86O43790 486 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 PSMD10O75832 226 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 KCNMA1Q12791 1236 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 SF3B2Q13435 895 aaKnown RBP23.69■■□□□ 1.38
CNTFR-202ENST00000378980 EPM2AIP1Q7L775 607 aaPredicted RBP23.69■■□□□ 1.38
CNTFR-202ENST00000378980 OTOP1Q7RTM1 612 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 SFR1Q86XK3 245 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 NEK11Q8NG66 645 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 BAP1Q92560 729 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 SLC5A5Q92911 643 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 EPC1Q9H2F5 836 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 BHMT2Q9H2M3 363 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 RGL1Q9NZL6 768 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 ARHGAP20Q9P2F6 1191 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 RABGAP1Q9Y3P9 1069 aa23.69■■□□□ 1.38
CNTFR-202ENST00000378980 RCCD1A6NED2 376 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 PLEKP08567 350 aaPredicted RBP23.68■■□□□ 1.38
CNTFR-202ENST00000378980 PPP2R5CQ13362 524 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 WHAMMP3Q1A5X7 153 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 LRCH2Q5VUJ6 765 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 LDHDQ86WU2 507 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 CCDC155Q8N6L0 562 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 EHBP1Q8NDI1 1231 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 CCDC42Q96M95 316 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 HSD17B14Q9BPX1 270 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 TUFT1Q9NNX1 390 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 MYOZ2Q9NPC6 264 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 FAM53CQ9NYF3 392 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 LRRC53A6NM62 1247 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 CIAPIN1Q6FI81 312 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 ARHGAP27Q6ZUM4 889 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 SMCR8Q8TEV9 937 aaPredicted RBP23.68■■□□□ 1.38
CNTFR-202ENST00000378980 RUSC1Q9BVN2 902 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 PIM2Q9P1W9 311 aa23.68■■□□□ 1.38
CNTFR-202ENST00000378980 PUF60Q9UHX1 559 aaKnown RBP23.68■■□□□ 1.38
CNTFR-202ENST00000378980 ZSCAN20P17040 1043 aaPredicted RBP23.67■■□□□ 1.38
CNTFR-202ENST00000378980 ADAM9Q13443 819 aa23.67■■□□□ 1.38
CNTFR-202ENST00000378980 RRAGAQ7L523 313 aa23.67■■□□□ 1.38
CNTFR-202ENST00000378980 LACRTQ9GZZ8 138 aa23.67■■□□□ 1.38
CNTFR-202ENST00000378980 ZSWIM4Q9H7M6 989 aa23.67■■□□□ 1.38
CNTFR-202ENST00000378980 ZNF263O14978 683 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 PTGER2P43116 358 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 VAV2P52735 878 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 UBXN2AP68543 259 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 CEP55Q53EZ4 464 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 PDXDC1Q6P996 788 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 SAMD1Q6SPF0 538 aaPredicted RBP23.66■■□□□ 1.38
CNTFR-202ENST00000378980 DEFB129Q9H1M3 183 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 MYO6Q9UM54 1294 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 TRAF3IP3Q9Y228 551 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.66■■□□□ 1.38
CNTFR-202ENST00000378980 BRCA1P38398 1863 aaKnown RBP23.66■■□□□ 1.38
CNTFR-202ENST00000378980 SHTN1A0MZ66 631 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 CETN3O15182 167 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 CYP27A1Q02318 531 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 SPA17Q15506 151 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 KNOP1Q1ED39 458 aaKnown RBP23.66■■□□□ 1.38
CNTFR-202ENST00000378980 TMCO3Q6UWJ1 677 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 PURBQ96QR8 312 aaKnown RBP23.66■■□□□ 1.38
CNTFR-202ENST00000378980 FAM184BQ9ULE4 1060 aa23.66■■□□□ 1.38
CNTFR-202ENST00000378980 PHF20L1A8MW92 1017 aa23.65■■□□□ 1.38
CNTFR-202ENST00000378980 RSPH10B2B2RC85 870 aa23.65■■□□□ 1.38
CNTFR-202ENST00000378980 ZRANB2O95218 330 aaKnown RBP eCLIP23.65■■□□□ 1.38
CNTFR-202ENST00000378980 RSPH10BP0C881 870 aa23.65■■□□□ 1.38
CNTFR-202ENST00000378980 HOXD13P35453 343 aa23.65■■□□□ 1.38
CNTFR-202ENST00000378980 CTTNQ14247 550 aaKnown RBP23.65■■□□□ 1.38
CNTFR-202ENST00000378980 BMT2Q1RMZ1 405 aa23.65■■□□□ 1.38
CNTFR-202ENST00000378980 SLC30A10Q6XR72 485 aa23.65■■□□□ 1.38
CNTFR-202ENST00000378980 ZNF341Q9BYN7 854 aa23.65■■□□□ 1.38
CNTFR-202ENST00000378980 TSGA10Q9BZW7 698 aa23.65■■□□□ 1.38
CNTFR-202ENST00000378980 CEP72Q9P209 647 aa23.65■■□□□ 1.38
CNTFR-202ENST00000378980 TBCAO75347 108 aaKnown RBP23.64■■□□□ 1.38
CNTFR-202ENST00000378980 SLITRK3O94933 977 aa23.64■■□□□ 1.38
CNTFR-202ENST00000378980 LCA5LO95447 670 aa23.64■■□□□ 1.38
CNTFR-202ENST00000378980 TFRCP02786 760 aaKnown RBP23.64■■□□□ 1.38
CNTFR-202ENST00000378980 MYBP10242 640 aa23.64■■□□□ 1.38
CNTFR-202ENST00000378980 NR2F2P24468 414 aa23.64■■□□□ 1.38
CNTFR-202ENST00000378980 PRELPP51888 382 aa23.64■■□□□ 1.38
CNTFR-202ENST00000378980 KIF11P52732 1056 aa23.64■■□□□ 1.38
CNTFR-202ENST00000378980 SETQ01105 290 aaPredicted RBP23.64■■□□□ 1.38
CNTFR-202ENST00000378980 RINT1Q6NUQ1 792 aa23.64■■□□□ 1.38
CNTFR-202ENST00000378980 TRAPPC11Q7Z392 1133 aa23.64■■□□□ 1.38
CNTFR-202ENST00000378980 CACNA2D4Q7Z3S7 1137 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms