RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ZHX2Q9Y6X8 837 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 PDHBP11177 359 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 ATF7P17544 494 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-203ENST00000378169 TMOD1P28289 359 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 RUFY4Q6ZNE9 571 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 RGL1Q9NZL6 768 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 KCNG1Q9UIX4 513 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 BZW2Q9Y6E2 419 aaKnown RBP14.39□□□□□ -0.11
NPHP4-203ENST00000378169 ABCB11O95342 1321 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 STK4Q13043 487 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 RNF207Q6ZRF8 634 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 ACCSQ96QU6 501 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 WRNIP1Q96S55 665 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 MMS19Q96T76 1030 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 ADGRG1Q9Y653 693 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 PVALEFA0A1B0GWK0 134 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 LRRC53A6NM62 1247 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 GAS8O95995 478 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 NDUFB10O96000 172 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 CA8P35219 290 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 SUPT20HL1Q3ZLR7 823 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 PDXDC2PQ6P474 469 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 DYDC2Q96IM9 177 aa14.39□□□□□ -0.11
NPHP4-203ENST00000378169 SLC7A5Q01650 507 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 E4F1Q66K89 784 aaPredicted RBP14.38□□□□□ -0.11
NPHP4-203ENST00000378169 ANKRD40Q6AI12 368 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 EPB41L5Q9HCM4 733 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 NRBP2Q9NSY0 501 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 COMMD10Q9Y6G5 202 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 ARHGAP23Q9P227 1491 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 OSTNP61366 133 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 KSR1Q8IVT5 923 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 RAB17Q9H0T7 212 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 NKIRAS1Q9NYS0 192 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 JRKLQ9Y4A0 524 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 SMIM22K7EJ46 135 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 HEXIM1O94992 359 aaKnown RBP14.38□□□□□ -0.11
NPHP4-203ENST00000378169 NSFP46459 744 aaKnown RBP14.38□□□□□ -0.11
NPHP4-203ENST00000378169 PTK2Q05397 1052 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 KCNH2Q12809 1159 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 MKRN3Q13064 507 aaKnown RBP14.38□□□□□ -0.11
NPHP4-203ENST00000378169 MTMR1Q13613 665 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 PTPAQ15257 358 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 PPP1R21Q6ZMI0 780 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 CAPN12Q6ZSI9 719 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 C16orf86Q6ZW13 317 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 PPP1R16BQ96T49 567 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 CCSER1Q9C0I3 900 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 SAMD15Q9P1V8 674 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 TXNDC16Q9P2K2 825 aa14.38□□□□□ -0.11
NPHP4-203ENST00000378169 SLC8A3P57103 927 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 CHP1Q99653 195 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 PPANQ9NQ55 473 aaKnown RBP14.37□□□□□ -0.11
NPHP4-203ENST00000378169 PNMA2Q9UL42 364 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 SLIT1O75093 1534 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 GPR75-ASB3A0A0A6YYF3 556 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 PIK3CAP42336 1068 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 CCZ1BP86790 482 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 CCZ1P86791 482 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-203ENST00000378169 FAM20AQ96MK3 541 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 WDR24Q96S15 920 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 COL5A2P05997 1499 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-203ENST00000378169 MYO1FO00160 1098 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 STXBP3O00186 592 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 LMNB1P20700 586 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 MARK3P27448 753 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 YARSP54577 528 aaKnown RBP14.37□□□□□ -0.11
NPHP4-203ENST00000378169 NFIAQ12857 509 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 NTRK3Q16288 839 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 TTC19Q6DKK2 380 aaPredicted RBP14.37□□□□□ -0.11
NPHP4-203ENST00000378169 RNF169Q8NCN4 708 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 FBF1Q8TES7 1133 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 ZNF653Q96CK0 615 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 POLLQ9UGP5 575 aa14.37□□□□□ -0.11
NPHP4-203ENST00000378169 CCDC151A5D8V7 595 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 IPO5O00410 1097 aaKnown RBP14.36□□□□□ -0.11
NPHP4-203ENST00000378169 NR3C1P04150 777 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 SERPING1P05155 500 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 GYS1P13807 737 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 ATP2A2P16615 1042 aaKnown RBP14.36□□□□□ -0.11
NPHP4-203ENST00000378169 FXR1P51114 621 aaKnown RBP eCLIP14.36□□□□□ -0.11
NPHP4-203ENST00000378169 DPYDQ12882 1025 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 STRIP1Q5VSL9 837 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 KAZNQ674X7 775 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 GUF1Q8N442 669 aaKnown RBP14.36□□□□□ -0.11
NPHP4-203ENST00000378169 MAGOHBQ96A72 148 aaKnown RBP14.36□□□□□ -0.11
NPHP4-203ENST00000378169 TMEM206Q9H813 350 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 ANAPC4Q9UJX5 808 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 PTPN22Q9Y2R2 807 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 E7EVH7 732 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 TOB1P50616 345 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-203ENST00000378169 FAM47CQ5HY64 1035 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 PROCA1Q8NCQ7 364 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-203ENST00000378169 AGXT2Q9BYV1 514 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 FAM204AQ9H8W3 233 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 NPHP3-ACAD11A0A0J9YXS1 232 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 MFAP3P55082 362 aa14.36□□□□□ -0.11
NPHP4-203ENST00000378169 LACTBP83111 547 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-203ENST00000378169 GFPT1Q06210 699 aaPredicted RBP14.36□□□□□ -0.11
NPHP4-203ENST00000378169 SCYL2Q6P3W7 929 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms