RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 TPH2Q8IWU9 490 aa21.28■■□□□ 1
PCDHA4-201ENST00000378125 SYT2Q8N9I0 419 aaPredicted RBP21.28■■□□□ 1
PCDHA4-201ENST00000378125 RUSC1Q9BVN2 902 aa21.28■■□□□ 1
PCDHA4-201ENST00000378125 SRGAP2O75044 1071 aa21.27■■□□□ 1
PCDHA4-201ENST00000378125 MYBP10242 640 aa21.27■■□□□ 1
PCDHA4-201ENST00000378125 CAP2P40123 477 aa21.27■■□□□ 1
PCDHA4-201ENST00000378125 CACNA2D4Q7Z3S7 1137 aa21.27■■□□□ 1
PCDHA4-201ENST00000378125 GPR161Q8N6U8 529 aaKnown RBP21.27■■□□□ 1
PCDHA4-201ENST00000378125 EIF3CLB5ME19 914 aaKnown RBP21.27■□□□□ 0.99
PCDHA4-201ENST00000378125 PIK3CDO00329 1044 aa21.27■□□□□ 0.99
PCDHA4-201ENST00000378125 WNT10BO00744 389 aa21.27■□□□□ 0.99
PCDHA4-201ENST00000378125 ATP1A1P05023 1023 aaKnown RBP21.27■□□□□ 0.99
PCDHA4-201ENST00000378125 EIF4A3P38919 411 aaKnown RBP21.27■□□□□ 0.99
PCDHA4-201ENST00000378125 NEK11Q8NG66 645 aa21.27■□□□□ 0.99
PCDHA4-201ENST00000378125 EIF3CQ99613 913 aaKnown RBP21.27■□□□□ 0.99
PCDHA4-201ENST00000378125 DEF6Q9H4E7 631 aa21.27■□□□□ 0.99
PCDHA4-201ENST00000378125 MYO1AQ9UBC5 1043 aa21.27■□□□□ 0.99
PCDHA4-201ENST00000378125 MYO6Q9UM54 1294 aa21.27■□□□□ 0.99
PCDHA4-201ENST00000378125 PLAGL2Q9UPG8 496 aa21.27■□□□□ 0.99
PCDHA4-201ENST00000378125 RGPD3A6NKT7 1758 aaPredicted RBP21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 RGPD4Q7Z3J3 1758 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 CCDC170Q8IYT3 715 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 CEP112Q8N8E3 955 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 CHURC1Q8WUH1 139 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 AGBL1Q96MI9 1066 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 RANBP17Q9H2T7 1088 aaKnown RBP21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 ST7Q9NRC1 585 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 PKD2L1Q9P0L9 805 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 FRMD3A2A2Y4 597 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 KRT86O43790 486 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 EGFRP00533 1210 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 CYP3A4P08684 503 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 POLD1P28340 1107 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 PSME4Q14997 1843 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 LRCH2Q5VUJ6 765 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 RABGGTAQ92696 567 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 ZBTB9Q96C00 473 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 DYDC2Q96IM9 177 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 PPP1R1BQ9UD71 204 aaPredicted RBP21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 RABGAP1Q9Y3P9 1069 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 FHOD1Q9Y613 1164 aa21.26■□□□□ 0.99
PCDHA4-201ENST00000378125 ABCB11O95342 1321 aa21.25■□□□□ 0.99
PCDHA4-201ENST00000378125 RHOXF2BP0C7M4 288 aa21.25■□□□□ 0.99
PCDHA4-201ENST00000378125 NR2F2P24468 414 aa21.25■□□□□ 0.99
PCDHA4-201ENST00000378125 SPA17Q15506 151 aa21.25■□□□□ 0.99
PCDHA4-201ENST00000378125 LDHDQ86WU2 507 aa21.25■□□□□ 0.99
PCDHA4-201ENST00000378125 BAP1Q92560 729 aa21.25■□□□□ 0.99
PCDHA4-201ENST00000378125 RHOXF2Q9BQY4 288 aa21.25■□□□□ 0.99
PCDHA4-201ENST00000378125 LSM14BQ9BX40 385 aaKnown RBP21.25■□□□□ 0.99
PCDHA4-201ENST00000378125 ZNF341Q9BYN7 854 aa21.25■□□□□ 0.99
PCDHA4-201ENST00000378125 IKZF4Q9H2S9 585 aa21.25■□□□□ 0.99
PCDHA4-201ENST00000378125 PITPNM2Q9BZ72 1349 aa21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 KCNA1Q09470 495 aa21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 OTOP1Q7RTM1 612 aa21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 CAPZA3Q96KX2 299 aa21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 DDX39AO00148 427 aaKnown RBP21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 AKR1B10O60218 316 aa21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 ARP10275 920 aa21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 INPP5BP32019 993 aa21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 HOXD13P35453 343 aa21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 KIF11P52732 1056 aa21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 AMPD2Q01433 879 aa21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 ENOX2Q16206 610 aaKnown RBP21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 KRT222Q8N1A0 295 aa21.24■□□□□ 0.99
PCDHA4-201ENST00000378125 ZBTB7AO95365 584 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 PNMA6AP0CW24 399 aaPredicted RBP21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 BMS1Q14692 1282 aaKnown RBP21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 CEP63Q96MT8 703 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 ANKZF1Q9H8Y5 726 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 SLITRK3O94933 977 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 GCNT3O95395 438 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 POLR2FP61218 127 aaKnown RBP21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 ARID5AQ03989 594 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 KIF5AQ12840 1032 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 TRIM59Q8IWR1 403 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 CPXCR1Q8N123 301 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 DRC1Q96MC2 740 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 IFIH1Q9BYX4 1025 aaKnown RBP21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 MYOZ2Q9NPC6 264 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 RNF216Q9NWF9 866 aaPredicted RBP21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 SYNPO2Q9UMS6 1093 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 MRPL11Q9Y3B7 192 aaKnown RBP21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 PCDHA13Q9Y5I0 950 aa21.23■□□□□ 0.99
PCDHA4-201ENST00000378125 CETN3O15182 167 aa21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 CLIC2O15247 247 aa21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 NOL4O94818 638 aa21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 ZRANB2O95218 330 aaKnown RBP eCLIP21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 EPS15P42566 896 aa21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 VAV2P52735 878 aa21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 GFPT1Q06210 699 aaPredicted RBP21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 SF3B2Q13435 895 aaKnown RBP21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 RASA3Q14644 834 aa21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 GRIPAP1Q4V328 841 aa21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 TDRD12Q587J7 1177 aaKnown RBP21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 CC2D1AQ6P1N0 951 aaPredicted RBP21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 PDXDC1Q6P996 788 aa21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 ANKRD13CQ8N6S4 541 aa21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 AGBL3Q8NEM8 1001 aa21.22■□□□□ 0.99
PCDHA4-201ENST00000378125 MLXIPQ9HAP2 919 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms