RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 GRB10Q13322 594 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 KRT32Q14532 448 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 PLEKHG4Q58EX7 1191 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 WWC2Q6AWC2 1192 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.11■■□□□ 1.45
VSX1-201ENST00000376707 RASEFQ8IZ41 740 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 LMBR1Q8WVP7 490 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 SEPT1Q8WYJ6 367 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 SEPT8Q92599 483 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 BRPF3Q9ULD4 1205 aa24.11■■□□□ 1.45
VSX1-201ENST00000376707 SPTBN5Q9NRC6 3674 aaKnown RBP24.11■■□□□ 1.45
VSX1-201ENST00000376707 NRCAMQ92823 1304 aa24.1■■□□□ 1.45
VSX1-201ENST00000376707 ADCK5Q3MIX3 580 aa24.1■■□□□ 1.45
VSX1-201ENST00000376707 KRT40Q6A162 431 aa24.1■■□□□ 1.45
VSX1-201ENST00000376707 MYOCDQ8IZQ8 938 aa24.1■■□□□ 1.45
VSX1-201ENST00000376707 JADE2Q9NQC1 790 aa24.1■■□□□ 1.45
VSX1-201ENST00000376707 PTPRSQ13332 1948 aa24.1■■□□□ 1.45
VSX1-201ENST00000376707 MAFGO15525 162 aa24.09■■□□□ 1.45
VSX1-201ENST00000376707 ADAM17P78536 824 aa24.09■■□□□ 1.45
VSX1-201ENST00000376707 PPP1R18Q6NYC8 613 aa24.09■■□□□ 1.45
VSX1-201ENST00000376707 TGS1Q96RS0 853 aaKnown RBP24.09■■□□□ 1.45
VSX1-201ENST00000376707 MTUS1Q9ULD2 1270 aa24.09■■□□□ 1.45
VSX1-201ENST00000376707 DOCK5Q9H7D0 1870 aa24.09■■□□□ 1.45
VSX1-201ENST00000376707 KLF18A0A0U1RQI7 1052 aa24.08■■□□□ 1.45
VSX1-201ENST00000376707 GOLGA8AA7E2F4 631 aa24.08■■□□□ 1.45
VSX1-201ENST00000376707 GOLGA8BA8MQT2 603 aa24.08■■□□□ 1.45
VSX1-201ENST00000376707 HMGB1P09429 215 aaKnown RBP24.08■■□□□ 1.45
VSX1-201ENST00000376707 FGD1P98174 961 aa24.08■■□□□ 1.45
VSX1-201ENST00000376707 ADAMTS19Q8TE59 1207 aa24.08■■□□□ 1.45
VSX1-201ENST00000376707 GLG1Q92896 1179 aa24.08■■□□□ 1.45
VSX1-201ENST00000376707 RIC8AQ9NPQ8 531 aa24.08■■□□□ 1.45
VSX1-201ENST00000376707 ERAP1Q9NZ08 941 aa24.08■■□□□ 1.45
VSX1-201ENST00000376707 NAP1L2Q9ULW6 460 aaPredicted RBP24.08■■□□□ 1.45
VSX1-201ENST00000376707 INSL6Q9Y581 213 aa24.08■■□□□ 1.45
VSX1-201ENST00000376707 V9GY48 417 aaPredicted RBP24.08■■□□□ 1.45
VSX1-201ENST00000376707 GSTTP1A0A1W2PQM5 241 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 LINC01553A4QN01 128 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 hCG_1984214I3L0E3 225 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 TNFRSF10AO00220 468 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 MARK3P27448 753 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 ADCY7P51828 1080 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 FUT2Q10981 343 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 PPFIA1Q13136 1202 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 MKRN4PQ13434 485 aaPredicted RBP24.07■■□□□ 1.44
VSX1-201ENST00000376707 AAK1Q2M2I8 961 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 TYW1BQ6NUM6 668 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 TEX2Q8IWB9 1127 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 ZNF713Q8N859 430 aaPredicted RBP24.07■■□□□ 1.44
VSX1-201ENST00000376707 GDPD5Q8WTR4 605 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 SMARCAD1Q9H4L7 1026 aa24.07■■□□□ 1.44
VSX1-201ENST00000376707 LPXNO60711 386 aa24.06■■□□□ 1.44
VSX1-201ENST00000376707 FOSP01100 380 aaPredicted RBP24.06■■□□□ 1.44
VSX1-201ENST00000376707 ERVK-21P61565 698 aa24.06■■□□□ 1.44
VSX1-201ENST00000376707 TFF2Q03403 129 aa24.06■■□□□ 1.44
VSX1-201ENST00000376707 TAF2Q6P1X5 1199 aa24.06■■□□□ 1.44
VSX1-201ENST00000376707 KCNB2Q92953 911 aa24.06■■□□□ 1.44
VSX1-201ENST00000376707 MXRA8Q9BRK3 442 aa24.06■■□□□ 1.44
VSX1-201ENST00000376707 OSBPL7Q9BZF2 842 aa24.06■■□□□ 1.44
VSX1-201ENST00000376707 JPH1Q9HDC5 661 aaPredicted RBP24.06■■□□□ 1.44
VSX1-201ENST00000376707 KCNH7Q9NS40 1196 aa24.06■■□□□ 1.44
VSX1-201ENST00000376707 GRIK4Q16099 956 aa24.05■■□□□ 1.44
VSX1-201ENST00000376707 FAM26DQ5JW98 314 aa24.05■■□□□ 1.44
VSX1-201ENST00000376707 APBB2Q92870 758 aa24.05■■□□□ 1.44
VSX1-201ENST00000376707 PGBD1Q96JS3 809 aa24.05■■□□□ 1.44
VSX1-201ENST00000376707 UHRF1Q96T88 793 aaPredicted RBP24.05■■□□□ 1.44
VSX1-201ENST00000376707 BARHL2Q9NY43 387 aa24.05■■□□□ 1.44
VSX1-201ENST00000376707 TTC28Q96AY4 2481 aa24.05■■□□□ 1.44
VSX1-201ENST00000376707 SMCO2A6NFE2 343 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 STXBP3O00186 592 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 RCAN1P53805 252 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 HTRA4P83105 476 aaPredicted RBP24.04■■□□□ 1.44
VSX1-201ENST00000376707 RUFY4Q6ZNE9 571 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 RSPH3Q86UC2 560 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 SDF4Q9BRK5 362 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 ANO3Q9BYT9 981 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 IFIH1Q9BYX4 1025 aaKnown RBP24.04■■□□□ 1.44
VSX1-201ENST00000376707 GLT8D2Q9H1C3 349 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 SUGCTQ9HAC7 445 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 LMCD1Q9NZU5 365 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 SLC9A2Q9UBY0 812 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 TUBE1Q9UJT0 475 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 COG5Q9UP83 839 aa24.04■■□□□ 1.44
VSX1-201ENST00000376707 PRRC2BQ5JSZ5 2229 aaKnown RBP24.03■■□□□ 1.44
VSX1-201ENST00000376707 CDC27P30260 824 aa24.03■■□□□ 1.44
VSX1-201ENST00000376707 RPAINQ86UA6 219 aa24.03■■□□□ 1.44
VSX1-201ENST00000376707 CYP2W1Q8TAV3 490 aa24.03■■□□□ 1.44
VSX1-201ENST00000376707 YME1L1Q96TA2 773 aa24.03■■□□□ 1.44
VSX1-201ENST00000376707 AZI2Q9H6S1 392 aa24.03■■□□□ 1.44
VSX1-201ENST00000376707 FAM217BQ9NTX9 383 aaPredicted RBP24.03■■□□□ 1.44
VSX1-201ENST00000376707 CCDC196A0A1B0GTZ2 297 aa24.02■■□□□ 1.44
VSX1-201ENST00000376707 UPP2O95045 317 aa24.02■■□□□ 1.44
VSX1-201ENST00000376707 CHRNA1P02708 482 aa24.02■■□□□ 1.44
VSX1-201ENST00000376707 CPA1P15085 419 aa24.02■■□□□ 1.44
VSX1-201ENST00000376707 METAP2P50579 478 aaKnown RBP eCLIP24.02■■□□□ 1.44
VSX1-201ENST00000376707 IGBP1P78318 339 aa24.02■■□□□ 1.44
VSX1-201ENST00000376707 AP3B2Q13367 1082 aa24.02■■□□□ 1.44
VSX1-201ENST00000376707 CEP55Q53EZ4 464 aa24.02■■□□□ 1.44
VSX1-201ENST00000376707 TOP1MTQ969P6 601 aa24.02■■□□□ 1.44
VSX1-201ENST00000376707 TMEM260Q9NX78 707 aa24.02■■□□□ 1.44
VSX1-201ENST00000376707 NFASCO94856 1347 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms