RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 INO80B-WBP1J3KQ70 363 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 CSPG5O95196 566 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 NEK2P51955 445 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 EPHB1P54762 984 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 CYP4A11Q02928 519 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 SLMAPQ14BN4 828 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 FAM26FQ5R3K3 315 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 USP6NLQ92738 828 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 ACCSQ96QU6 501 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 INO80BQ9C086 356 aaPredicted RBP13.42□□□□□ -0.26
VPS13A-204ENST00000376634 HLA-DPA1P20036 260 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 COPB1P53618 953 aaKnown RBP13.42□□□□□ -0.26
VPS13A-204ENST00000376634 HABP4Q5JVS0 413 aaKnown RBP13.42□□□□□ -0.26
VPS13A-204ENST00000376634 LRRC4Q9HBW1 653 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 GOLGA8SH3BPF8 625 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 E2F6O75461 281 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 FAM133BQ5BKY9 247 aaKnown RBP13.42□□□□□ -0.26
VPS13A-204ENST00000376634 DHTKD1Q96HY7 919 aaPredicted RBP13.42□□□□□ -0.26
VPS13A-204ENST00000376634 FSD1LQ9BXM9 530 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 FANCLQ9NW38 375 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 IQANK1A0A1B0GTG1 560 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 FOSP01100 380 aaPredicted RBP13.42□□□□□ -0.26
VPS13A-204ENST00000376634 CMA1P23946 247 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 AK8Q96MA6 479 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 TSC22D3Q99576 134 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 EPAS1Q99814 870 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 NDUFA8P51970 172 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 RWDD4Q6NW29 188 aaKnown RBP13.42□□□□□ -0.26
VPS13A-204ENST00000376634 CEP70Q8NHQ1 597 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 NEURL1BA8MQ27 555 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 TCP10L2B9ZVM9 353 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 TMEM232C9JQI7 657 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 FANCBQ8NB91 859 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 PPP1R13BQ96KQ4 1090 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 SEC24BO95487 1268 aa13.42□□□□□ -0.26
VPS13A-204ENST00000376634 UHRF1BP1Q6BDS2 1440 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 USP17L12C9JPN9 530 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 USP17L21D6R901 530 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 FAM98CQ17RN3 349 aaKnown RBP13.41□□□□□ -0.26
VPS13A-204ENST00000376634 GRAMD1BQ3KR37 738 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 SDR42E1Q8WUS8 393 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 SUCLG2Q96I99 432 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 SLITRK6Q9H5Y7 841 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 LMBRD1Q9NUN5 540 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 DHX9Q08211 1270 aaKnown RBP13.41□□□□□ -0.26
VPS13A-204ENST00000376634 GOLGA8FQ08AF8 430 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 GOLGA8DPQ0D2H9 430 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 BZW1Q7L1Q6 419 aaKnown RBP13.41□□□□□ -0.26
VPS13A-204ENST00000376634 PBKQ96KB5 322 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 L3MBTL1Q9Y468 752 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 SRGAP2CP0DJJ0 459 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 TMCO5AQ8N6Q1 288 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 MTBPQ96DY7 904 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 CDHR1Q96JP9 859 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 MAPK13O15264 365 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 CFLARO15519 480 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 ZBED1O96006 694 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 OCA2Q04671 838 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 EXT2Q93063 718 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 TRIM45Q9H8W5 580 aaPredicted RBP13.41□□□□□ -0.26
VPS13A-204ENST00000376634 CCDC159P0C7I6 412 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 CUL1Q13616 776 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 EPB41L5Q9HCM4 733 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 MYH13Q9UKX3 1938 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 RGS12O14924 1447 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 PLTPP55058 493 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 PTK2BQ14289 1009 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 ELMOD1Q8N336 334 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 ALKBH8Q96BT7 664 aaKnown RBP13.41□□□□□ -0.26
VPS13A-204ENST00000376634 NACC1Q96RE7 527 aa13.41□□□□□ -0.26
VPS13A-204ENST00000376634 PHLPP2Q6ZVD8 1323 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 VPS39Q96JC1 886 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 USP19O94966 1318 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 SNX2O60749 519 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 DCTN3O75935 186 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 DAB2P98082 770 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 E2F5Q15329 346 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 DACH2Q96NX9 599 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 TM6SF1Q9BZW5 370 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 HPCAL4Q9UM19 191 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 RPS8P62241 208 aaKnown RBP13.4□□□□□ -0.26
VPS13A-204ENST00000376634 FOXD4Q12950 439 aaPredicted RBP13.4□□□□□ -0.26
VPS13A-204ENST00000376634 GPATCH4Q5T3I0 446 aaKnown RBP13.4□□□□□ -0.26
VPS13A-204ENST00000376634 C6orf118Q5T5N4 469 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 MAFGO15525 162 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 TCP11X2Q5H9J9 407 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 ADAMTS12P58397 1594 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 IPO5O00410 1097 aaKnown RBP13.4□□□□□ -0.26
VPS13A-204ENST00000376634 SPAG7O75391 227 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 DRP2Q13474 957 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 MORF4L2Q15014 288 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 KRT39Q6A163 491 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 CENPUQ71F23 418 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 AMNQ9BXJ7 453 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 KIF24Q5T7B8 1368 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 OSBPP22059 807 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 ALS2CLQ60I27 953 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 TNKSO95271 1327 aa13.4□□□□□ -0.26
VPS13A-204ENST00000376634 M0R2C6 588 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms