RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 PACSIN1Q9BY11 444 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 GCNT4Q9P109 453 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 PRR12Q9ULL5 1215 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 LMO7Q8WWI1 1683 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 NPEPPSP55786 919 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 COG2Q14746 738 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 MAN2A1Q16706 1144 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 LRRC15Q8TF66 581 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 UBLCP1Q8WVY7 318 aaPredicted RBP12.81□□□□□ -0.36
DDR1-227ENST00000376570 NOX5Q96PH1 765 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 PANX2Q96RD6 677 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 SPZ1Q9BXG8 430 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 GPRC5CQ9NQ84 441 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 CTTNBP2NLQ9P2B4 639 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 ANKFY1Q9P2R3 1169 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 DPEP1P16444 411 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 EEF1GP26641 437 aaKnown RBP12.81□□□□□ -0.36
DDR1-227ENST00000376570 PEX3P56589 373 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 IGBP1P78318 339 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 RNF187Q5TA31 235 aaPredicted RBP12.81□□□□□ -0.36
DDR1-227ENST00000376570 PLA2G4FQ68DD2 849 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 COG1Q8WTW3 980 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 REEP2Q9BRK0 252 aa12.81□□□□□ -0.36
DDR1-227ENST00000376570 BUB1BO60566 1050 aaPredicted RBP12.8□□□□□ -0.36
DDR1-227ENST00000376570 TNFAIP3P21580 790 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 CASP5P51878 434 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 ARHGEF16Q5VV41 709 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 UNC13DQ70J99 1090 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 PODNQ7Z5L7 613 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 GPR161Q8N6U8 529 aaKnown RBP12.8□□□□□ -0.36
DDR1-227ENST00000376570 SPIRE2Q8WWL2 714 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 PLA2G4AP47712 749 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 RASA3Q14644 834 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 E2F4Q16254 413 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 ZNF394Q53GI3 561 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 PROM2Q8N271 834 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 FBXL16Q8N461 479 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 ZKSCAN4Q969J2 545 aaPredicted RBP12.8□□□□□ -0.36
DDR1-227ENST00000376570 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 LRRC27Q9C0I9 530 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 ADAM21Q9UKJ8 722 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 RCCD1A6NED2 376 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 PALMO75781 387 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 PPP4CP60510 307 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 ZBED6P86452 979 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 MTM1Q13496 603 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 HDXQ7Z353 690 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 CDR2LQ86X02 465 aaPredicted RBP12.8□□□□□ -0.36
DDR1-227ENST00000376570 CATSPER3Q86XQ3 398 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 PNMA5Q96PV4 448 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 NT5C3AQ9H0P0 336 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 HAUS4Q9H6D7 363 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 CAPN6Q9Y6Q1 641 aa12.8□□□□□ -0.36
DDR1-227ENST00000376570 PHLPP2Q6ZVD8 1323 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 GOLGA6L10A6NI86 522 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 SLC16A4O15374 487 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 GTF2A1P52655 376 aaPredicted RBP12.79□□□□□ -0.36
DDR1-227ENST00000376570 SEZ6Q53EL9 994 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 EAPPQ56P03 285 aaPredicted RBP12.79□□□□□ -0.36
DDR1-227ENST00000376570 CC2D1AQ6P1N0 951 aaPredicted RBP12.79□□□□□ -0.36
DDR1-227ENST00000376570 TMEM179Q6ZVK1 233 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 PEX26Q7Z412 305 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 DUSP9Q99956 384 aaKnown RBP12.79□□□□□ -0.36
DDR1-227ENST00000376570 ADAM33Q9BZ11 813 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 PTPN22Q9Y2R2 807 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 MRFAP1Q9Y605 127 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 LRRC37A3O60309 1634 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 ZSCAN5CA6NGD5 496 aaPredicted RBP12.79□□□□□ -0.36
DDR1-227ENST00000376570 FAM186BQ8IYM0 893 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 GIMAP8Q8ND71 665 aaPredicted RBP12.79□□□□□ -0.36
DDR1-227ENST00000376570 EIF2AK1Q9BQI3 630 aaKnown RBP12.79□□□□□ -0.36
DDR1-227ENST00000376570 RUSC1Q9BVN2 902 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 PICK1Q9NRD5 415 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 GSTTP1A0A1W2PQM5 241 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 A0A1W2PRG0 241 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 GALNT17Q6IS24 598 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 TTI2Q6NXR4 508 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 AK8Q96MA6 479 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 EPB41L5Q9HCM4 733 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 ACP6Q9NPH0 428 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 SWAP70Q9UH65 585 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 FHOD1Q9Y613 1164 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 ZHX2Q9Y6X8 837 aa12.79□□□□□ -0.36
DDR1-227ENST00000376570 FAM86B1E9PN63 330 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 FAM86B2P0C5J1 330 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 ARP10275 920 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 TRIM14Q14142 442 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 MESDQ14696 234 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 MTERF2Q49AM1 385 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 NAA15Q9BXJ9 866 aaKnown RBP12.78□□□□□ -0.36
DDR1-227ENST00000376570 CCSER1Q9C0I3 900 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 BLOC1S4Q9NUP1 217 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
DDR1-227ENST00000376570 TNNI1P19237 187 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 RPL13P26373 211 aaKnown RBP12.78□□□□□ -0.36
DDR1-227ENST00000376570 MNAT1P51948 309 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 TRIP13Q15645 432 aaPredicted RBP12.78□□□□□ -0.36
DDR1-227ENST00000376570 IQCEQ6IPM2 695 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 LDHDQ86WU2 507 aa12.78□□□□□ -0.36
DDR1-227ENST00000376570 CHURC1Q8WUH1 139 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms