RNA–Protein interactions for RNA: ENST00000376569.7

DDR1-226, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,783 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-226ENST00000376569 HOOK2Q96ED9 719 aa13.92□□□□□ -0.18
DDR1-226ENST00000376569 MASTLQ96GX5 879 aa13.92□□□□□ -0.18
DDR1-226ENST00000376569 LRRC1Q9BTT6 524 aa13.92□□□□□ -0.18
DDR1-226ENST00000376569 FGFBP2Q9BYJ0 223 aa13.92□□□□□ -0.18
DDR1-226ENST00000376569 TMEM39BQ9GZU3 492 aa13.92□□□□□ -0.18
DDR1-226ENST00000376569 GOLGA6AQ9NYA3 693 aa13.92□□□□□ -0.18
DDR1-226ENST00000376569 GCNT4Q9P109 453 aa13.92□□□□□ -0.18
DDR1-226ENST00000376569 ABCB11O95342 1321 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 KCNA1Q09470 495 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 CC2D2BQ6DHV5 1058 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 PPM1KQ8N3J5 372 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 CCDC17Q96LX7 622 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 STK17AQ9UEE5 414 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 MED24O75448 989 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 TBC1D8O95759 1140 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 SRGNP10124 158 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 TXLNBQ8N3L3 684 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 TAB3Q8N5C8 712 aaPredicted RBP13.91□□□□□ -0.18
DDR1-226ENST00000376569 CTTNBP2NLQ9P2B4 639 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 NFU1Q9UMS0 254 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 RNF40O75150 1001 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 CDR1P51861 262 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 ECM1Q16610 540 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 MIER3Q7Z3K6 550 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 PNMA5Q96PV4 448 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 ZNF341Q9BYN7 854 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 CUEDC2Q9H467 287 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 SWAP70Q9UH65 585 aa13.91□□□□□ -0.18
DDR1-226ENST00000376569 CASP4P49662 377 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 HERVK_113P62684 666 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 CETN1Q12798 172 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 CFAP221Q4G0U5 840 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 AFAP1L1Q8TED9 768 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 BBXQ8WY36 941 aaPredicted RBP13.9□□□□□ -0.18
DDR1-226ENST00000376569 PACSIN1Q9BY11 444 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 MYH15Q9Y2K3 1946 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 PDE4DIPQ5VU43 2346 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 FAM237AA0A1B0GTK4 181 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 ZBTB7AO95365 584 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 SHMT1P34896 483 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 REEP2Q9BRK0 252 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 RAVER2Q9HCJ3 691 aaKnown RBP13.9□□□□□ -0.18
DDR1-226ENST00000376569 BLOC1S4Q9NUP1 217 aa13.9□□□□□ -0.18
DDR1-226ENST00000376569 CALUO43852 315 aaPredicted RBP13.9□□□□□ -0.19
DDR1-226ENST00000376569 H2AFXP16104 143 aaPredicted RBP13.9□□□□□ -0.19
DDR1-226ENST00000376569 BIRC3Q13489 604 aa13.9□□□□□ -0.19
DDR1-226ENST00000376569 DGKZQ13574 1117 aa13.9□□□□□ -0.19
DDR1-226ENST00000376569 LRRC15Q8TF66 581 aa13.9□□□□□ -0.19
DDR1-226ENST00000376569 HDAC7Q8WUI4 952 aa13.9□□□□□ -0.19
DDR1-226ENST00000376569 TSGA10Q9BZW7 698 aa13.9□□□□□ -0.19
DDR1-226ENST00000376569 RIC8AQ9NPQ8 531 aa13.9□□□□□ -0.19
DDR1-226ENST00000376569 TMEM150BA6NC51 233 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 HEXIM1O94992 359 aaKnown RBP13.89□□□□□ -0.19
DDR1-226ENST00000376569 ZNF211Q13398 564 aaPredicted RBP13.89□□□□□ -0.19
DDR1-226ENST00000376569 XKR9Q5GH70 373 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 CATSPER3Q86XQ3 398 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 CERS3Q8IU89 383 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 FAM186BQ8IYM0 893 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 FAM76AQ8TAV0 307 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 STK32BQ9NY57 414 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 ZSCAN5CA6NGD5 496 aaPredicted RBP13.89□□□□□ -0.19
DDR1-226ENST00000376569 KLRC4O43908 158 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 MCM3P25205 808 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 STAT1P42224 750 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 KCNB1Q14721 858 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 C4orf32Q8N8J7 132 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 GINS2Q9Y248 185 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 KDM3AQ9Y4C1 1321 aa13.89□□□□□ -0.19
DDR1-226ENST00000376569 GSTTP1A0A1W2PQM5 241 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 COPB2P35606 906 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 ARHGAP20Q9P2F6 1191 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 USP20Q9Y2K6 914 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 PHRF1Q9P1Y6 1649 aaKnown RBP13.88□□□□□ -0.19
DDR1-226ENST00000376569 ATRNO75882 1429 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 H3BQF6 201 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 ADCY1Q08828 1119 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 ALKBH5Q6P6C2 394 aaKnown RBP13.88□□□□□ -0.19
DDR1-226ENST00000376569 GBP6Q6ZN66 633 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 SLFN12Q8IYM2 578 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 GUF1Q8N442 669 aaKnown RBP13.88□□□□□ -0.19
DDR1-226ENST00000376569 C7orf25Q9BPX7 421 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 MMTAG2Q9BU76 263 aaKnown RBP13.88□□□□□ -0.19
DDR1-226ENST00000376569 DHX36Q9H2U1 1008 aaKnown RBP13.88□□□□□ -0.19
DDR1-226ENST00000376569 USTQ9Y2C2 406 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 MYO5AQ9Y4I1 1855 aaKnown RBP13.88□□□□□ -0.19
DDR1-226ENST00000376569 GGCXP38435 758 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 CCDC93Q567U6 631 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 PODNQ7Z5L7 613 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 DNAJC17Q9NVM6 304 aaKnown RBP13.88□□□□□ -0.19
DDR1-226ENST00000376569 EP400Q96L91 3159 aa13.88□□□□□ -0.19
DDR1-226ENST00000376569 POLRMTO00411 1230 aaKnown RBP13.87□□□□□ -0.19
DDR1-226ENST00000376569 KRIT1O00522 736 aa13.87□□□□□ -0.19
DDR1-226ENST00000376569 PPP1R11O60927 126 aaPredicted RBP13.87□□□□□ -0.19
DDR1-226ENST00000376569 GCLMP48507 274 aa13.87□□□□□ -0.19
DDR1-226ENST00000376569 CASP5P51878 434 aa13.87□□□□□ -0.19
DDR1-226ENST00000376569 APOBEC3HQ6NTF7 200 aaKnown RBP13.87□□□□□ -0.19
DDR1-226ENST00000376569 TMEM179Q6ZVK1 233 aa13.87□□□□□ -0.19
DDR1-226ENST00000376569 STXBP4Q6ZWJ1 553 aa13.87□□□□□ -0.19
DDR1-226ENST00000376569 SELENOOQ9BVL4 669 aa13.87□□□□□ -0.19
DDR1-226ENST00000376569 EHMT1Q9H9B1 1298 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms