RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 IL17RAQ96F46 866 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 PIGSQ96S52 555 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 GPR20Q99678 358 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 KRT23Q9C075 422 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 FAM50BQ9Y247 325 aa15.17■□□□□ 0.02
CLCN6-205ENST00000376492 MYH7BA7E2Y1 1941 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 PALM3A6NDB9 673 aaPredicted RBP15.16■□□□□ 0.02
CLCN6-205ENST00000376492 GHRP10912 638 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 ARHGAP4P98171 946 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 SP4Q02446 784 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 CTC1Q2NKJ3 1217 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 FAM26DQ5JW98 314 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 UTP14CQ5TAP6 766 aaKnown RBP15.16■□□□□ 0.02
CLCN6-205ENST00000376492 RUFY4Q6ZNE9 571 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 FIBCD1Q8N539 461 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 APBB2Q92870 758 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 MAP4K1Q92918 833 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 INPP4AQ96PE3 977 aaPredicted RBP15.16■□□□□ 0.02
CLCN6-205ENST00000376492 USP26Q9BXU7 913 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 RTEL1Q9NZ71 1219 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 MUTYHQ9UIF7 546 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 ADGRA3Q8IWK6 1321 aa15.16■□□□□ 0.02
CLCN6-205ENST00000376492 MYO7AQ13402 2215 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 SPATA31C2B4DYI2 1134 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 C5orf67F2Z3F1 127 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 LINC01565O15544 149 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 CYTH3O43739 400 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 TBX10O75333 385 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 CHRNA1P02708 482 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 BMPR1AP36894 532 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 ADAM17P78536 824 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 SMAD2Q15796 467 aaKnown RBP15.15■□□□□ 0.02
CLCN6-205ENST00000376492 GNPTABQ3T906 1256 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 SAMD3Q8N6K7 520 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 C11orf84Q9BUA3 381 aaPredicted RBP15.15■□□□□ 0.02
CLCN6-205ENST00000376492 CNNM2Q9H8M5 875 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 RC3H2Q9HBD1 1191 aaKnown RBP15.15■□□□□ 0.02
CLCN6-205ENST00000376492 SENP2Q9HC62 589 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
CLCN6-205ENST00000376492 MYH6P13533 1939 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 FRMPD4Q14CM0 1322 aa15.15■□□□□ 0.02
CLCN6-205ENST00000376492 MBTPS2O43462 519 aa15.14■□□□□ 0.01
CLCN6-205ENST00000376492 GNAT1P11488 350 aa15.14■□□□□ 0.01
CLCN6-205ENST00000376492 ICAM3P32942 547 aa15.14■□□□□ 0.01
CLCN6-205ENST00000376492 NEDD9Q14511 834 aa15.14■□□□□ 0.01
CLCN6-205ENST00000376492 GRM4Q14833 912 aa15.14■□□□□ 0.01
CLCN6-205ENST00000376492 ESYT1Q9BSJ8 1104 aa15.14■□□□□ 0.01
CLCN6-205ENST00000376492 IGFLR1Q9H665 355 aa15.14■□□□□ 0.01
CLCN6-205ENST00000376492 RIOX1Q9H6W3 641 aa15.14■□□□□ 0.01
CLCN6-205ENST00000376492 ZNF215Q9UL58 517 aaPredicted RBP15.14■□□□□ 0.01
CLCN6-205ENST00000376492 ATG2AQ2TAZ0 1938 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 TRIOO75962 3097 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 FIBPO43427 364 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 NCK2O43639 380 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 RB1P06400 928 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 MGAT3Q09327 533 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 LPIN1Q14693 890 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 NLRC5Q86WI3 1866 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 RNF135Q8IUD6 432 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 PIBF1Q8WXW3 757 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 UPF3BQ9BZI7 483 aaKnown RBP15.13■□□□□ 0.01
CLCN6-205ENST00000376492 LMAN2LQ9H0V9 348 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 EHMT1Q9H9B1 1298 aa15.13■□□□□ 0.01
CLCN6-205ENST00000376492 ALG13Q9NP73 1137 aaKnown RBP15.13■□□□□ 0.01
CLCN6-205ENST00000376492 RALGAPA2Q2PPJ7 1873 aa15.12■□□□□ 0.01
CLCN6-205ENST00000376492 ZNF318Q5VUA4 2279 aa15.12■□□□□ 0.01
CLCN6-205ENST00000376492 PNMA6FA0A0J9YX94 578 aa15.12■□□□□ 0.01
CLCN6-205ENST00000376492 MMP1P03956 469 aa15.12■□□□□ 0.01
CLCN6-205ENST00000376492 CYP21A2P08686 494 aa15.12■□□□□ 0.01
CLCN6-205ENST00000376492 SMAD4Q13485 552 aaKnown RBP15.12■□□□□ 0.01
CLCN6-205ENST00000376492 CAMK1Q14012 370 aa15.12■□□□□ 0.01
CLCN6-205ENST00000376492 BTG3Q14201 252 aaPredicted RBP15.12■□□□□ 0.01
CLCN6-205ENST00000376492 HERC4Q5GLZ8 1057 aaPredicted RBP15.12■□□□□ 0.01
CLCN6-205ENST00000376492 LINC01599Q8WXQ3 324 aa15.12■□□□□ 0.01
CLCN6-205ENST00000376492 CLP1Q92989 425 aaKnown RBP15.12■□□□□ 0.01
CLCN6-205ENST00000376492 PHOX2BQ99453 314 aa15.12■□□□□ 0.01
CLCN6-205ENST00000376492 LSG1Q9H089 658 aaKnown RBP15.12■□□□□ 0.01
CLCN6-205ENST00000376492 KCNH6Q9H252 994 aa15.12■□□□□ 0.01
CLCN6-205ENST00000376492 NRCAMQ92823 1304 aa15.12■□□□□ 0.01
CLCN6-205ENST00000376492 STXBP3O00186 592 aa15.11■□□□□ 0.01
CLCN6-205ENST00000376492 ENPP3O14638 875 aa15.11■□□□□ 0.01
CLCN6-205ENST00000376492 STAM2O75886 525 aa15.11■□□□□ 0.01
CLCN6-205ENST00000376492 DNAJB1P25685 340 aa15.11■□□□□ 0.01
CLCN6-205ENST00000376492 MARK3P27448 753 aa15.11■□□□□ 0.01
CLCN6-205ENST00000376492 USP17L6PQ6QN14 398 aa15.11■□□□□ 0.01
CLCN6-205ENST00000376492 ZNF689Q96CS4 500 aaPredicted RBP15.11■□□□□ 0.01
CLCN6-205ENST00000376492 ZBTB10Q96DT7 871 aa15.11■□□□□ 0.01
CLCN6-205ENST00000376492 POP1Q99575 1024 aaKnown RBP15.11■□□□□ 0.01
CLCN6-205ENST00000376492 CD207Q9UJ71 328 aa15.11■□□□□ 0.01
CLCN6-205ENST00000376492 RWDD3Q9Y3V2 267 aa15.11■□□□□ 0.01
CLCN6-205ENST00000376492 MRPL42Q9Y6G3 142 aaKnown RBP15.11■□□□□ 0.01
CLCN6-205ENST00000376492 CDC45O75419 566 aa15.1■□□□□ 0.01
CLCN6-205ENST00000376492 DGKIO75912 1065 aa15.1■□□□□ 0.01
CLCN6-205ENST00000376492 TCF7P36402 384 aaPredicted RBP15.1■□□□□ 0.01
CLCN6-205ENST00000376492 TRAF1Q13077 416 aa15.1■□□□□ 0.01
CLCN6-205ENST00000376492 PPFIA1Q13136 1202 aa15.1■□□□□ 0.01
CLCN6-205ENST00000376492 FBXO47Q5MNV8 452 aa15.1■□□□□ 0.01
CLCN6-205ENST00000376492 TAF2Q6P1X5 1199 aa15.1■□□□□ 0.01
CLCN6-205ENST00000376492 CASC1Q6TDU7 716 aa15.1■□□□□ 0.01
CLCN6-205ENST00000376492 ADGRD2Q7Z7M1 963 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms