RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 ECHDC1Q9NTX5 307 aa12.73□□□□□ -0.37
DDX39B-201ENST00000376177 TELO2Q9Y4R8 837 aa12.73□□□□□ -0.37
DDX39B-201ENST00000376177 WDR19Q8NEZ3 1342 aa12.73□□□□□ -0.37
DDX39B-201ENST00000376177 GVINP1Q7Z2Y8 2422 aa12.73□□□□□ -0.37
DDX39B-201ENST00000376177 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-201ENST00000376177 ITGB1P05556 798 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 SLC3A2P08195 630 aaKnown RBP12.72□□□□□ -0.37
DDX39B-201ENST00000376177 SMIM10L2AP0DMW4 78 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 SMIM10L2BP0DMW5 78 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 HOXC8P31273 242 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 NBL1P41271 181 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 ZNF543Q08ER8 600 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 STXBP2Q15833 593 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 PTPN21Q16825 1174 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 VPS53Q5VIR6 699 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 EFHBQ8N7U6 833 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 SPPL3Q8TCT6 385 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 RMDN3Q96TC7 470 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 PHF7Q9BWX1 381 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-201ENST00000376177 RNPEPQ9H4A4 650 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 CDH22Q9UJ99 828 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 MRVI1Q9Y6F6 885 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 MRPL42Q9Y6G3 142 aaKnown RBP12.72□□□□□ -0.37
DDX39B-201ENST00000376177 KAT6AQ92794 2004 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 C17orf102A2RUQ5 167 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 PER2O15055 1255 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 TRAK2O60296 914 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 ICAM3P32942 547 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 DDIT3P35638 169 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 MFAP1P55081 439 aaKnown RBP12.72□□□□□ -0.37
DDX39B-201ENST00000376177 LAMC2Q13753 1193 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 MYSM1Q5VVJ2 828 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 CHD1LQ86WJ1 897 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 ADSSL1Q8N142 457 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 NSUN6Q8TEA1 469 aaKnown RBP12.72□□□□□ -0.37
DDX39B-201ENST00000376177 ZNF689Q96CS4 500 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-201ENST00000376177 RIPOR3Q96MK2 946 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 APOL5Q9BWW9 433 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 NACAP1Q9BZK3 213 aa12.72□□□□□ -0.37
DDX39B-201ENST00000376177 B4DLN1 442 aa12.71□□□□□ -0.38
DDX39B-201ENST00000376177 GOLGA6L22H0YM25 854 aa12.71□□□□□ -0.38
DDX39B-201ENST00000376177 HMMRO75330 724 aa12.71□□□□□ -0.38
DDX39B-201ENST00000376177 CHRNA1P02708 482 aa12.71□□□□□ -0.38
DDX39B-201ENST00000376177 TOP1P11387 765 aaKnown RBP12.71□□□□□ -0.38
DDX39B-201ENST00000376177 CLCN1P35523 988 aa12.71□□□□□ -0.38
DDX39B-201ENST00000376177 MRPL12P52815 198 aaKnown RBP12.71□□□□□ -0.38
DDX39B-201ENST00000376177 BTG3Q14201 252 aaPredicted RBP12.71□□□□□ -0.38
DDX39B-201ENST00000376177 RRP12Q5JTH9 1297 aaKnown RBP12.71□□□□□ -0.38
DDX39B-201ENST00000376177 CLEC17AQ6ZS10 378 aa12.71□□□□□ -0.38
DDX39B-201ENST00000376177 IL31RAQ8NI17 732 aa12.71□□□□□ -0.38
DDX39B-201ENST00000376177 LINC01599Q8WXQ3 324 aa12.71□□□□□ -0.38
DDX39B-201ENST00000376177 SPATA33Q96N06 139 aa12.71□□□□□ -0.38
DDX39B-201ENST00000376177 LRRCC1Q9C099 1032 aa12.71□□□□□ -0.38
DDX39B-201ENST00000376177 SETD4Q9NVD3 440 aa12.71□□□□□ -0.38
DDX39B-201ENST00000376177 FNDC1Q4ZHG4 1894 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-201ENST00000376177 CACNA1BQ00975 2339 aa12.7□□□□□ -0.38
DDX39B-201ENST00000376177 GGPS1O95749 300 aa12.7□□□□□ -0.38
DDX39B-201ENST00000376177 NR3C2P08235 984 aa12.7□□□□□ -0.38
DDX39B-201ENST00000376177 GHRP10912 638 aa12.7□□□□□ -0.38
DDX39B-201ENST00000376177 CELF3Q5SZQ8 465 aaKnown RBP12.7□□□□□ -0.38
DDX39B-201ENST00000376177 ARHGEF16Q5VV41 709 aa12.7□□□□□ -0.38
DDX39B-201ENST00000376177 KLHL23Q8NBE8 558 aa12.7□□□□□ -0.38
DDX39B-201ENST00000376177 RGS22Q8NE09 1264 aa12.7□□□□□ -0.38
DDX39B-201ENST00000376177 POF1BQ8WVV4 589 aa12.7□□□□□ -0.38
DDX39B-201ENST00000376177 SUSD6Q92537 303 aa12.7□□□□□ -0.38
DDX39B-201ENST00000376177 IRF2BPLQ9H1B7 796 aa12.7□□□□□ -0.38
DDX39B-201ENST00000376177 PXMP2Q9NR77 195 aa12.7□□□□□ -0.38
DDX39B-201ENST00000376177 OPLAHO14841 1288 aa12.69□□□□□ -0.38
DDX39B-201ENST00000376177 PPFIA4O75335 1185 aa12.69□□□□□ -0.38
DDX39B-201ENST00000376177 EIF3JO75822 258 aaKnown RBP12.69□□□□□ -0.38
DDX39B-201ENST00000376177 DGKIO75912 1065 aa12.69□□□□□ -0.38
DDX39B-201ENST00000376177 ZFYP08048 801 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-201ENST00000376177 SNHG28P0DPA3 235 aa12.69□□□□□ -0.38
DDX39B-201ENST00000376177 UBA1P22314 1058 aaKnown RBP12.69□□□□□ -0.38
DDX39B-201ENST00000376177 GATMP50440 423 aa12.69□□□□□ -0.38
DDX39B-201ENST00000376177 CDC37Q16543 378 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-201ENST00000376177 PAN2Q504Q3 1202 aaKnown RBP12.69□□□□□ -0.38
DDX39B-201ENST00000376177 PPP4R3BQ5MIZ7 849 aa12.69□□□□□ -0.38
DDX39B-201ENST00000376177 RUFY4Q6ZNE9 571 aa12.69□□□□□ -0.38
DDX39B-201ENST00000376177 TRIM50Q86XT4 487 aa12.69□□□□□ -0.38
DDX39B-201ENST00000376177 IWS1Q96ST2 819 aa12.69□□□□□ -0.38
DDX39B-201ENST00000376177 TOMM22Q9NS69 142 aa12.69□□□□□ -0.38
DDX39B-201ENST00000376177 H3BRB1 525 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 ENPP3O14638 875 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 ORC4O43929 436 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 PPFIA3O75145 1194 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 BRD1O95696 1058 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 LGALS2P05162 132 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 MYCLP12524 364 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-201ENST00000376177 LPIN1Q14693 890 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 FAM26DQ5JW98 314 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 ZMYM1Q5SVZ6 1142 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 RMDN1Q96DB5 314 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 TUT1Q9H6E5 874 aaKnown RBP12.68□□□□□ -0.38
DDX39B-201ENST00000376177 RWDD3Q9Y3V2 267 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 CFAP47Q6ZTR5 3102 aa12.68□□□□□ -0.38
DDX39B-201ENST00000376177 XRCC6P12956 609 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDX39B-201ENST00000376177 RTN4RL1Q86UN2 441 aaPredicted RBP12.67□□□□□ -0.38
DDX39B-201ENST00000376177 KREMEN2Q8NCW0 462 aa12.67□□□□□ -0.38
DDX39B-201ENST00000376177 APBB2Q92870 758 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms