RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 ZNF233A6NK53 670 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 EDIL3O43854 480 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 PAFAH1B1P43034 410 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 NNTQ13423 1086 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 MAN2A1Q16706 1144 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 CLEC10AQ8IUN9 316 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 SLC16A10Q8TF71 515 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 CALML4Q96GE6 196 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 KRT12Q99456 494 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 SERPINB13Q9UIV8 391 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 GOLGA8KD6RF30 607 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 HEXIM1O94992 359 aaKnown RBP16.73■□□□□ 0.27
MSH5-203ENST00000375750 AKR1B1P15121 316 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 TCP1P17987 556 aaKnown RBP16.73■□□□□ 0.27
MSH5-203ENST00000375750 NT5C2P49902 561 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 EIF6P56537 245 aaKnown RBP16.73■□□□□ 0.27
MSH5-203ENST00000375750 ASTE1Q2TB18 679 aaPredicted RBP16.73■□□□□ 0.27
MSH5-203ENST00000375750 LRRC55Q6ZSA7 311 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 SUPT20HQ8NEM7 779 aa16.73■□□□□ 0.27
MSH5-203ENST00000375750 RNPC3Q96LT9 517 aaKnown RBP16.73■□□□□ 0.27
MSH5-203ENST00000375750 ERLIN2O94905 339 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 ZNF572Q7Z3I7 529 aaPredicted RBP16.72■□□□□ 0.27
MSH5-203ENST00000375750 NELFCDQ8IXH7 590 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 AK8Q96MA6 479 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 CUEDC2Q9H467 287 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 LCA5LO95447 670 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 KLRC1P26715 233 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 GNAQP50148 359 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 FKBP1AP62942 108 aaKnown RBP16.72■□□□□ 0.27
MSH5-203ENST00000375750 EHHADHQ08426 723 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 PIK3R5Q8WYR1 880 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 DDX12PQ92771 950 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.72■□□□□ 0.27
MSH5-203ENST00000375750 FAM196BA6NMK8 535 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 USP17L5A8MUK1 530 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 LAD1O00515 517 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 RAD17O75943 681 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 NOL4O94818 638 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 SSBP05455 408 aaKnown RBP eCLIP16.72■□□□□ 0.27
MSH5-203ENST00000375750 SEC24CP53992 1094 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 POLR2FP61218 127 aaKnown RBP16.72■□□□□ 0.27
MSH5-203ENST00000375750 AMPD3Q01432 767 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 KRT25Q7Z3Z0 450 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 KLHL7Q8IXQ5 586 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 CASKIN2Q8WXE0 1202 aa16.72■□□□□ 0.27
MSH5-203ENST00000375750 LARP4BQ92615 738 aaKnown RBP16.72■□□□□ 0.27
MSH5-203ENST00000375750 NPHP3-ACAD11A0A0J9YXS1 232 aa16.71■□□□□ 0.27
MSH5-203ENST00000375750 OPA1O60313 960 aa16.71■□□□□ 0.27
MSH5-203ENST00000375750 PRLRP16471 622 aa16.71■□□□□ 0.27
MSH5-203ENST00000375750 CDK5RAP3Q96JB5 506 aa16.71■□□□□ 0.27
MSH5-203ENST00000375750 NOX5Q96PH1 765 aa16.71■□□□□ 0.27
MSH5-203ENST00000375750 MRIQ9BWK5 157 aa16.71■□□□□ 0.27
MSH5-203ENST00000375750 LSM14BQ9BX40 385 aaKnown RBP16.71■□□□□ 0.27
MSH5-203ENST00000375750 FAM107BQ9H098 131 aa16.71■□□□□ 0.27
MSH5-203ENST00000375750 PPP1R1BQ9UD71 204 aaPredicted RBP16.71■□□□□ 0.27
MSH5-203ENST00000375750 FAM198AQ9UFP1 575 aa16.71■□□□□ 0.27
MSH5-203ENST00000375750 SHTN1A0MZ66 631 aa16.71■□□□□ 0.26
MSH5-203ENST00000375750 DDTLA6NHG4 134 aaPredicted RBP16.71■□□□□ 0.26
MSH5-203ENST00000375750 NDUFAB1O14561 156 aa16.71■□□□□ 0.26
MSH5-203ENST00000375750 CALCRLQ16602 461 aa16.71■□□□□ 0.26
MSH5-203ENST00000375750 UNC13DQ70J99 1090 aa16.71■□□□□ 0.26
MSH5-203ENST00000375750 RTKN2Q8IZC4 609 aa16.71■□□□□ 0.26
MSH5-203ENST00000375750 LARGE2Q8N3Y3 721 aa16.71■□□□□ 0.26
MSH5-203ENST00000375750 TBC1D5Q92609 795 aa16.71■□□□□ 0.26
MSH5-203ENST00000375750 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.26
MSH5-203ENST00000375750 C6orf50Q9HD87 102 aa16.71■□□□□ 0.26
MSH5-203ENST00000375750 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 TRAF5O00463 557 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 SHMT1P34896 483 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 SOGA3Q5TF21 947 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 EMBQ6PCB8 327 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 OR2W6PQ8NHA6 318 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 SNX29Q8TEQ0 813 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 PRMT6Q96LA8 375 aaPredicted RBP16.7■□□□□ 0.26
MSH5-203ENST00000375750 CENPHQ9H3R5 247 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 SERPINA10Q9UK55 444 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 UBE2SQ16763 222 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 CFAP58Q5T655 872 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 MTMR4Q9NYA4 1195 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 ADAMTS1Q9UHI8 967 aa16.7■□□□□ 0.26
MSH5-203ENST00000375750 A0A087X0T9 212 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 MYO1FO00160 1098 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 PJA2O43164 708 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 HLA-DOAP06340 250 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 FAM228BP0C875 321 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
MSH5-203ENST00000375750 CFAP221Q4G0U5 840 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 CCDC40Q4G0X9 1142 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 FAM83BQ5T0W9 1011 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 KCNV1Q6PIU1 500 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 DDX42Q86XP3 938 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■□□□□ 8.3
MSH5-203ENST00000375750 REXO1Q8N1G1 1221 aaKnown RBP16.69■□□□□ 0.26
MSH5-203ENST00000375750 LRRC47Q8N1G4 583 aaKnown RBP16.69■□□□□ 0.26
MSH5-203ENST00000375750 CAVIN3Q969G5 261 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 MTMR9Q96QG7 549 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 MAGEF1Q9HAY2 307 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 ZBTB12Q9Y330 459 aaPredicted RBP16.69■□□□□ 0.26
MSH5-203ENST00000375750 MPHOSPH10O00566 681 aaKnown RBP16.69■□□□□ 0.26
MSH5-203ENST00000375750 CPP00450 1065 aa16.69■□□□□ 0.26
MSH5-203ENST00000375750 ITIH3Q06033 890 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms