RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
UBXN11-204ENST00000374217 NMRK2Q9NPI5 230 aa16.52■□□□□ 0.24
UBXN11-204ENST00000374217 MAGEC2Q9UBF1 373 aaPredicted RBP16.52■□□□□ 0.24
UBXN11-204ENST00000374217 CEP83Q9Y592 693 aa16.52■□□□□ 0.24
UBXN11-204ENST00000374217 GREB1LQ9C091 1923 aaPredicted RBP16.52■□□□□ 0.24
UBXN11-204ENST00000374217 CHUKO15111 745 aa16.52■□□□□ 0.23
UBXN11-204ENST00000374217 POTEIP0CG38 1075 aa16.52■□□□□ 0.23
UBXN11-204ENST00000374217 POTEJP0CG39 1038 aa16.52■□□□□ 0.23
UBXN11-204ENST00000374217 PSEN1P49768 467 aa16.52■□□□□ 0.23
UBXN11-204ENST00000374217 GRM4Q14833 912 aa16.52■□□□□ 0.23
UBXN11-204ENST00000374217 MAP1SQ66K74 1059 aaPredicted RBP16.52■□□□□ 0.23
UBXN11-204ENST00000374217 FAM114A1Q8IWE2 563 aa16.52■□□□□ 0.23
UBXN11-204ENST00000374217 SMYD4Q8IYR2 804 aaPredicted RBP16.52■□□□□ 0.23
UBXN11-204ENST00000374217 ADSSL1Q8N142 457 aa16.52■□□□□ 0.23
UBXN11-204ENST00000374217 CMTR1Q8N1G2 835 aaKnown RBP16.52■□□□□ 0.23
UBXN11-204ENST00000374217 STIM2Q9P246 746 aa16.52■□□□□ 0.23
UBXN11-204ENST00000374217 TRIM10Q9UDY6 481 aa16.52■□□□□ 0.23
UBXN11-204ENST00000374217 FZD1Q9UP38 647 aa16.52■□□□□ 0.23
UBXN11-204ENST00000374217 RPN1P04843 607 aaKnown RBP16.51■□□□□ 0.23
UBXN11-204ENST00000374217 CDC25AP30304 524 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 IREB2P48200 963 aaKnown RBP16.51■□□□□ 0.23
UBXN11-204ENST00000374217 TTC38Q5R3I4 469 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 LDHDQ86WU2 507 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 CREG2Q8IUH2 290 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 CCDC50Q8IVM0 306 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 OXER1Q8TDS5 423 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 ZKSCAN4Q969J2 545 aaPredicted RBP16.51■□□□□ 0.23
UBXN11-204ENST00000374217 KLRG1Q96E93 195 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 CAPZA3Q96KX2 299 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 ALS2CR12Q96Q35 445 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 EPN3Q9H201 632 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 JADE2Q9NQC1 790 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 ZNF112Q9UJU3 913 aa16.51■□□□□ 0.23
UBXN11-204ENST00000374217 USP17L5A8MUK1 530 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 H0YHG0 523 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 GOLGA8HP0CJ92 632 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 HNRNPH3P31942 346 aaKnown RBP16.5■□□□□ 0.23
UBXN11-204ENST00000374217 LONP1P36776 959 aaKnown RBP16.5■□□□□ 0.23
UBXN11-204ENST00000374217 SPA17Q15506 151 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 USP17L2Q6R6M4 530 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 TMTC3Q6ZXV5 915 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 TAX1BP1Q86VP1 789 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 SIAH1Q8IUQ4 282 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 GPATCH11Q8N954 259 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 ZBTB9Q96C00 473 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 LZTS2Q9BRK4 669 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 NHEJ1Q9H9Q4 299 aaPredicted RBP16.5■□□□□ 0.23
UBXN11-204ENST00000374217 GOPCQ9HD26 462 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
UBXN11-204ENST00000374217 HYOU1Q9Y4L1 999 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 MYH4Q9Y623 1939 aa16.5■□□□□ 0.23
UBXN11-204ENST00000374217 UBE2Q2LH0YL09 131 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 PDE2AO00408 941 aaPredicted RBP16.49■□□□□ 0.23
UBXN11-204ENST00000374217 PSMA7O14818 248 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 SRGAP2O75044 1071 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 USP2O75604 605 aaPredicted RBP16.49■□□□□ 0.23
UBXN11-204ENST00000374217 PLEKHA8P1O95397 391 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 LCA5LO95447 670 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 PDHBP11177 359 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 SMTNP53814 917 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 ASPRV1Q53RT3 343 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 SLFN13Q68D06 897 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 IRF2BP1Q8IU81 584 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 EIF1ADQ8N9N8 165 aaKnown RBP16.49■□□□□ 0.23
UBXN11-204ENST00000374217 SPATA4Q8NEY3 305 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 TNFRSF25Q93038 417 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 ACTR5Q9H9F9 607 aaPredicted RBP16.49■□□□□ 0.23
UBXN11-204ENST00000374217 EXOC1Q9NV70 894 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.49■□□□□ 0.23
UBXN11-204ENST00000374217 MAD2L2Q9UI95 211 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 SYNPO2Q9UMS6 1093 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 CSADQ9Y600 493 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 CAPN7Q9Y6W3 813 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 SSC5DA1L4H1 1573 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 KLRF2D3W0D1 207 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 F5H6K3 240 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 RDXP35241 583 aaKnown RBP16.49■□□□□ 0.23
UBXN11-204ENST00000374217 SLC1A4P43007 532 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 PAFAH1B1P43034 410 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 KLRC3Q07444 240 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 C2orf54Q08AI8 447 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 NEDD9Q14511 834 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 DHTKD1Q96HY7 919 aaPredicted RBP16.49■□□□□ 0.23
UBXN11-204ENST00000374217 MAGEF1Q9HAY2 307 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 AS3MTQ9HBK9 375 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 TMX2Q9Y320 296 aa16.49■□□□□ 0.23
UBXN11-204ENST00000374217 FRMPD2Q68DX3 1309 aaPredicted RBP16.48■□□□□ 0.23
UBXN11-204ENST00000374217 BICDL2A1A5D9 508 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 PALM3A6NDB9 673 aaPredicted RBP16.48■□□□□ 0.23
UBXN11-204ENST00000374217 HOXA7P31268 230 aaPredicted RBP16.48■□□□□ 0.23
UBXN11-204ENST00000374217 PRCPP42785 496 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 ECE1P42892 770 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 GPATCH4Q5T3I0 446 aaKnown RBP16.48■□□□□ 0.23
UBXN11-204ENST00000374217 FBXW10Q5XX13 1052 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 ARMC9Q7Z3E5 817 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 CCDC84Q86UT8 332 aaPredicted RBP16.48■□□□□ 0.23
UBXN11-204ENST00000374217 IFT20Q8IY31 132 aa16.48■□□□□ 0.23
UBXN11-204ENST00000374217 STAG2Q8N3U4 1231 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms