RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 GORASP1Q9BQQ3 440 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.12□□□□□ -0.153e-7■■■■■ 42.3
PRPF4-201ENST00000374198 PIDD1Q9HB75 910 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 BTAF1O14981 1849 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 F8VZ95 297 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 EPHB6O15197 1021 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 CIAO1O76071 339 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 MYBL1P10243 752 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 LACTBP83111 547 aaPredicted RBP14.12□□□□□ -0.15
PRPF4-201ENST00000374198 NUGGCQ68CJ6 796 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 TMC3Q7Z5M5 1100 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 KCNV2Q8TDN2 545 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 PHF20Q9BVI0 1012 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 ARHGEF3Q9NR81 526 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 CEP126Q9P2H0 1117 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 C2CD2Q9Y426 696 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 LRRC42Q9Y546 428 aa14.12□□□□□ -0.15
PRPF4-201ENST00000374198 MAP3K13O43283 966 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 ALDH3A1P30838 453 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 RANBP1P43487 201 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 EHHADHQ08426 723 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 IL17AQ16552 155 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 PI16Q6UXB8 463 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 MAEAQ7L5Y9 396 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 TMC4Q7Z404 712 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 CNBD1Q8NA66 436 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 GIMAP8Q8ND71 665 aaPredicted RBP14.11□□□□□ -0.15
PRPF4-201ENST00000374198 DHTKD1Q96HY7 919 aaPredicted RBP14.11□□□□□ -0.15
PRPF4-201ENST00000374198 PUS3Q9BZE2 481 aaKnown RBP14.11□□□□□ -0.15
PRPF4-201ENST00000374198 RAB17Q9H0T7 212 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 WDR35Q9P2L0 1181 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 PACSIN2Q9UNF0 486 aaPredicted RBP14.11□□□□□ -0.15
PRPF4-201ENST00000374198 STK38LQ9Y2H1 464 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 LRRC53A6NM62 1247 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 VIMP08670 466 aaKnown RBP14.11□□□□□ -0.15
PRPF4-201ENST00000374198 ADD2P35612 726 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 STAT6P42226 847 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 COPS2P61201 443 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 LBRQ14739 615 aaKnown RBP14.11□□□□□ -0.15
PRPF4-201ENST00000374198 CCDC57Q2TAC2 916 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 GPIHBP1Q8IV16 184 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 KIF2BQ8N4N8 673 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 FANCBQ8NB91 859 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 FAM81AQ8TBF8 368 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 FAM207AQ9NSI2 230 aaPredicted RBP14.11□□□□□ -0.15
PRPF4-201ENST00000374198 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
PRPF4-201ENST00000374198 TUBP50607 506 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 EIF3BP55884 814 aaKnown RBP14.11□□□□□ -0.15
PRPF4-201ENST00000374198 SGSM1Q2NKQ1 1148 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 RRAGAQ7L523 313 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 LMNTD2Q8IXW0 634 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 PROM2Q8N271 834 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 STAG2Q8N3U4 1231 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 PBKQ96KB5 322 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 IFT74Q96LB3 600 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 RNF26Q9BY78 433 aaPredicted RBP14.11□□□□□ -0.15
PRPF4-201ENST00000374198 NSRP1Q9H0G5 558 aaKnown RBP14.11□□□□□ -0.15
PRPF4-201ENST00000374198 SIK3Q9Y2K2 1263 aa14.11□□□□□ -0.15
PRPF4-201ENST00000374198 AFDNP55196 1824 aaKnown RBP14.1□□□□□ -0.15
PRPF4-201ENST00000374198 KLRC4O43908 158 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 FLOT1O75955 427 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 RHOBTB3O94955 611 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 MMP13P45452 471 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 DHX9Q08211 1270 aaKnown RBP14.1□□□□□ -0.15
PRPF4-201ENST00000374198 BNIP1Q12981 228 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 SLC39A6Q13433 755 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 WTAPQ15007 396 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 NKX1-1Q15270 411 aaPredicted RBP14.1□□□□□ -0.15
PRPF4-201ENST00000374198 NAB2Q15742 525 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 ZNF790Q6PG37 636 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 GIGYF2Q6Y7W6 1299 aaKnown RBP14.1□□□□□ -0.15
PRPF4-201ENST00000374198 SCFD2Q8WU76 684 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 SELENOSQ9BQE4 189 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 MTFR1LQ9H019 292 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 RREB1Q92766 1687 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 A0A1B0GVG6 124 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 NKRFO15226 690 aaKnown RBP eCLIP14.1□□□□□ -0.15
PRPF4-201ENST00000374198 WFS1O76024 890 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 CUL3Q13618 768 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 ANKRD40Q6AI12 368 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 GBP7Q8N8V2 638 aaPredicted RBP14.1□□□□□ -0.15
PRPF4-201ENST00000374198 P2RX5Q93086 422 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 RBM41Q96IZ5 413 aaKnown RBP14.1□□□□□ -0.15
PRPF4-201ENST00000374198 ZKSCAN3Q9BRR0 538 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 KRT23Q9C075 422 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 ADAM7Q9H2U9 754 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 CCDC134Q9H6E4 229 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 GGT7Q9UJ14 662 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 MYH7P12883 1935 aa14.1□□□□□ -0.15
PRPF4-201ENST00000374198 SSU72P8A0A1W2PR75 194 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 BICDL2A1A5D9 508 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 RBAK-RBAKDNI3L0D1 243 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 HIP1RO75146 1068 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 PYGBP11216 843 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 CCNE1P24864 410 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 ADAM9Q13443 819 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 HOOK3Q86VS8 718 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 TNFRSF25Q93038 417 aa14.09□□□□□ -0.15
PRPF4-201ENST00000374198 PRMT1Q99873 361 aaKnown RBP14.09□□□□□ -0.15
PRPF4-201ENST00000374198 SYT15Q9BQS2 421 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms