RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 FHOD1Q9Y613 1164 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 ESYT3A0FGR9 886 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 PLA2G4AP47712 749 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 KANSL2Q9H9L4 492 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 OVOS2A0A0G2JMS6 1433 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 ZNF185O15231 689 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 ATF7P17544 494 aaPredicted RBP18.91■□□□□ 0.62
PTPRU-202ENST00000373779 NSFP46459 744 aaKnown RBP18.91■□□□□ 0.62
PTPRU-202ENST00000373779 ITIH3Q06033 890 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 SLC44A5Q8NCS7 719 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.91■□□□□ 0.62
PTPRU-202ENST00000373779 IL17RAQ96F46 866 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 NT5C1BQ96P26 610 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 E2F4Q16254 413 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 CCDC38Q502W7 563 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 MICAL1Q8TDZ2 1067 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 CCSER1Q9C0I3 900 aa18.91■□□□□ 0.62
PTPRU-202ENST00000373779 SGO2Q562F6 1265 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 ICE2Q659A1 982 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 CAPN12Q6ZSI9 719 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 PALM2Q8IXS6 379 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 TCP11Q8WWU5 503 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 ZNF577Q9BSK1 485 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 AGXT2Q9BYV1 514 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 PARVGQ9HBI0 331 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 TMEM260Q9NX78 707 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 SLCO1A2P46721 670 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 AOC3Q16853 763 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 RSAD2Q8WXG1 361 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 NACC1Q96RE7 527 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 PSD3Q9NYI0 1048 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 DMP1Q13316 513 aaPredicted RBP18.9■□□□□ 0.62
PTPRU-202ENST00000373779 PDXDC1Q6P996 788 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 STAG2Q8N3U4 1231 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 JDP2Q8WYK2 163 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 JPH2Q9BR39 696 aaPredicted RBP18.9■□□□□ 0.62
PTPRU-202ENST00000373779 VCXQ9H320 206 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 UBE2TQ9NPD8 197 aaPredicted RBP18.9■□□□□ 0.62
PTPRU-202ENST00000373779 H0YIN7 160 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 LIG4P49917 911 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 KCNQ4P56696 695 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 IL9RQ01113 521 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 GRAPQ13588 217 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 E2F5Q15329 346 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 CDC37Q16543 378 aaPredicted RBP18.9■□□□□ 0.62
PTPRU-202ENST00000373779 GRAPLQ8TC17 118 aaPredicted RBP18.9■□□□□ 0.62
PTPRU-202ENST00000373779 MYO1FO00160 1098 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 CDAN1Q8IWY9 1227 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 LRRC1Q9BTT6 524 aa18.9■□□□□ 0.62
PTPRU-202ENST00000373779 TESPA1A2RU30 521 aaPredicted RBP18.89■□□□□ 0.61
PTPRU-202ENST00000373779 PSMD14O00487 310 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 KCNH2Q12809 1159 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 SPATA24Q86W54 205 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 HNRNPLLQ8WVV9 542 aaKnown RBP18.89■□□□□ 0.61
PTPRU-202ENST00000373779 CELF1Q92879 486 aaKnown RBP18.89■□□□□ 0.61
PTPRU-202ENST00000373779 ACCSQ96QU6 501 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 WDR11Q9BZH6 1224 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 TRIM9Q9C026 710 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 DIS3Q9Y2L1 958 aaKnown RBP18.89■□□□□ 0.61
PTPRU-202ENST00000373779 PPP1R3GB7ZBB8 358 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 UBXN2AP68543 259 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 RASGRF2O14827 1237 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 RHOBTB3O94955 611 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 NCAPHQ15003 741 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 DLGAP5Q15398 846 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 MAPK4P31152 587 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 SNX1Q13596 522 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 LRRC8CQ8TDW0 803 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 SRP68Q9UHB9 627 aaKnown RBP18.89■□□□□ 0.61
PTPRU-202ENST00000373779 ZNF148Q9UQR1 794 aa18.89■□□□□ 0.61
PTPRU-202ENST00000373779 E9PMD0 336 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 DEPTORQ8TB45 409 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 BHMT2Q9H2M3 363 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 PCIF1Q9H4Z3 704 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 CD2APQ9Y5K6 639 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 ALAS1P13196 640 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 PTK2Q05397 1052 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 SPICE1Q8N0Z3 855 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 FAM84BQ96KN1 310 aaPredicted RBP18.88■□□□□ 0.61
PTPRU-202ENST00000373779 AGPAT5Q9NUQ2 364 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 ZKSCAN8Q15776 578 aaPredicted RBP18.88■□□□□ 0.61
PTPRU-202ENST00000373779 FAM133BQ5BKY9 247 aaKnown RBP18.88■□□□□ 0.61
PTPRU-202ENST00000373779 MXD3Q9BW11 206 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 EDEM3Q9BZQ6 932 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 TMEM206Q9H813 350 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 HPCAL4Q9UM19 191 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 C6orf118Q5T5N4 469 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 SUPT20HQ8NEM7 779 aa18.88■□□□□ 0.61
PTPRU-202ENST00000373779 PPEF1O14829 653 aaPredicted RBP18.87■□□□□ 0.61
PTPRU-202ENST00000373779 ADCY2Q08462 1091 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 MUM1Q2TAK8 710 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 POMGNT1Q8WZA1 660 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 HSPA1LP34931 641 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 PPP1R18Q6NYC8 613 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 RHOT2Q8IXI1 618 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 NOA1Q8NC60 698 aaKnown RBP18.87■□□□□ 0.61
PTPRU-202ENST00000373779 CCDC110Q8TBZ0 833 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 GPR101Q96P66 508 aaPredicted RBP18.87■□□□□ 0.61
PTPRU-202ENST00000373779 PSMD1Q99460 953 aa18.87■□□□□ 0.61
PTPRU-202ENST00000373779 TAF1DQ9H5J8 278 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms