RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 LOC102724428A0A0B4J2F2 783 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 PVALEFA0A1B0GWK0 134 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 CHUKO15111 745 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 PDHBP11177 359 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 SIK1P57059 783 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 ZNF844Q08AG5 666 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 ITPK1Q13572 414 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 COBLL1Q53SF7 1204 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 C6orf89Q6UWU4 347 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 DZIP1Q86YF9 867 aaKnown RBP15.02□□□□□ -0.01
USP49-201ENST00000373006 PIGSQ96S52 555 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 OSBPL7Q9BZF2 842 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 LRRC4CQ9HCJ2 640 aa15.02□□□□□ -0.01
USP49-201ENST00000373006 LUC7LQ9NQ29 371 aaKnown RBP15.02□□□□□ -0.01
USP49-201ENST00000373006 CNOT8Q9UFF9 292 aaKnown RBP15.02□□□□□ -0.01
USP49-201ENST00000373006 NOVA2Q9UNW9 492 aaKnown RBP15.02□□□□□ -0.01
USP49-201ENST00000373006 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.02□□□□□ -0.01
USP49-201ENST00000373006 PPP1R12BO60237 982 aaPredicted RBP15.01□□□□□ -0.01
USP49-201ENST00000373006 RASSF9O75901 435 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 HIBADHP31937 336 aaKnown RBP15.01□□□□□ -0.01
USP49-201ENST00000373006 PPP4R3AQ6IN85 833 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 CHADLQ6NUI6 762 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 FBXO33Q7Z6M2 555 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 SH3RF3Q8TEJ3 882 aaPredicted RBP15.01□□□□□ -0.01
USP49-201ENST00000373006 PAGR1Q9BTK6 254 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 ISCUQ9H1K1 167 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 PLCB1Q9NQ66 1216 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 FBXL5Q9UKA1 691 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 TMCO5BA8MYB1 307 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 SART1O43290 800 aaKnown RBP15.01□□□□□ -0.01
USP49-201ENST00000373006 ACTN1P12814 892 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 GNA11P29992 359 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 FKBP3Q00688 224 aaKnown RBP15.01□□□□□ -0.01
USP49-201ENST00000373006 ECM1Q16610 540 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 MYOCDQ8IZQ8 938 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 ODF2LQ9ULJ1 636 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 TAF1P21675 1872 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 PHF20L1A8MW92 1017 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 H0YGN5 161 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 CDC25CP30307 473 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 CLNS1AP54105 237 aaKnown RBP15.01□□□□□ -0.01
USP49-201ENST00000373006 DIXDC1Q155Q3 683 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 REXO1Q8N1G1 1221 aaKnown RBP15.01□□□□□ -0.01
USP49-201ENST00000373006 TGFBRAP1Q8WUH2 860 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 HAUS2Q9NVX0 235 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 AMACRQ9UHK6 382 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.01□□□□□ -0.01
USP49-201ENST00000373006 NFS1Q9Y697 457 aa15.01□□□□□ -0.01
USP49-201ENST00000373006 DAPK3O43293 454 aa15□□□□□ -0.01
USP49-201ENST00000373006 ITGA4P13612 1032 aa15□□□□□ -0.01
USP49-201ENST00000373006 SLC51AQ86UW1 340 aa15□□□□□ -0.01
USP49-201ENST00000373006 ARFGAP2Q8N6H7 521 aa15□□□□□ -0.01
USP49-201ENST00000373006 RAD54LQ92698 747 aa15□□□□□ -0.01
USP49-201ENST00000373006 LEMD3Q9Y2U8 911 aa15□□□□□ -0.01
USP49-201ENST00000373006 COA7Q96BR5 231 aa15□□□□□ -0.01
USP49-201ENST00000373006 TRIM31Q9BZY9 425 aa15□□□□□ -0.01
USP49-201ENST00000373006 SEC63Q9UGP8 760 aaKnown RBP15□□□□□ -0.01
USP49-201ENST00000373006 SLC12A6Q9UHW9 1150 aa15□□□□□ -0.01
USP49-201ENST00000373006 TRAPPC3O43617 180 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 MAGOHP61326 146 aaKnown RBP14.99□□□□□ -0.01
USP49-201ENST00000373006 SATB1Q01826 763 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 PTK2Q05397 1052 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 MAPKAPK5Q8IW41 473 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 MDM1Q8TC05 714 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 RNF217Q8TC41 542 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 MAGOHBQ96A72 148 aaKnown RBP14.99□□□□□ -0.01
USP49-201ENST00000373006 SEC16BQ96JE7 1060 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 MTMR9Q96QG7 549 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 EDEM3Q9BZQ6 932 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 TMEM59LQ9UK28 342 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 DLEC1Q9Y238 1755 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 NPHP3-ACAD11A0A0J9YXS1 232 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 KCNQ2O43526 872 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 KIF4AO95239 1232 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 EPS15P42566 896 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 COASYQ13057 564 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 ASIC2Q16515 512 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 KRT79Q5XKE5 535 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 RAPGEF5Q92565 580 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 TBC1D31Q96DN5 1066 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 CELF4Q9BZC1 486 aaKnown RBP14.99□□□□□ -0.01
USP49-201ENST00000373006 DPH5Q9H2P9 285 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 ZHX3Q9H4I2 956 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 VEZTQ9HBM0 779 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 RIC8AQ9NPQ8 531 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 STK17AQ9UEE5 414 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 ABCB11O95342 1321 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 NHSL1Q5SYE7 1610 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 MYBP10242 640 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 TMEM266Q2M3C6 531 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 DCCP43146 1447 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 STRCP1A6NGW2 1772 aa14.99□□□□□ -0.01
USP49-201ENST00000373006 KRIT1O00522 736 aa14.98□□□□□ -0.01
USP49-201ENST00000373006 ELF1P32519 619 aa14.98□□□□□ -0.01
USP49-201ENST00000373006 CYB5D1Q6P9G0 228 aa14.98□□□□□ -0.01
USP49-201ENST00000373006 FUKQ8N0W3 1084 aa14.98□□□□□ -0.01
USP49-201ENST00000373006 NUCKS1Q9H1E3 243 aaKnown RBP14.98□□□□□ -0.01
USP49-201ENST00000373006 PANK4Q9NVE7 773 aa14.98□□□□□ -0.01
USP49-201ENST00000373006 A0A1B0GUL6 1792 aa14.98□□□□□ -0.01
USP49-201ENST00000373006 OPLAHO14841 1288 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms