RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 FOXO4P98177 505 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 PPARDQ03181 441 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 GABPB2Q8TAK5 448 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 GSDMBQ8TAX9 411 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 FANCLQ9NW38 375 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 UTYO14607 1347 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 PHLPP2Q6ZVD8 1323 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 PPP6R2O75170 966 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 CRCPO75575 148 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 SPATA1Q5VX52 437 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 ADAMTS13Q76LX8 1427 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 CDC23Q9UJX2 597 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 DIP2BQ9P265 1576 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 KRIT1O00522 736 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 MYL3P08590 195 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 SATB1Q01826 763 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 PSMD2Q13200 908 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 TRIM17Q9Y577 477 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 PNPLA6Q8IY17 1366 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 TXNDC9O14530 226 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 KCNK3O14649 394 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 IFNAR1P17181 557 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 IRX4P78413 519 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 PRR5LQ6MZQ0 368 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 ANKRD36BP1Q96IX9 119 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 ACCSQ96QU6 501 aa14.45□□□□□ -0.1
RAPGEF1-201ENST00000372189 LRRC7Q96NW7 1537 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 TBC1D8O95759 1140 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 PDE6CP51160 858 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 TRIM28Q13263 835 aaKnown RBP14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 TACO1Q9BSH4 297 aaKnown RBP14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 MIS12Q9H081 205 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 PFDN4Q9NQP4 134 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 RRP15Q9Y3B9 282 aaKnown RBP14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 A0A1W2PQ27 194 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 A0A1W2PQ64 194 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 A0A1W2PQD8 194 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 RNASELQ05823 741 aaKnown RBP14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 IFRD2Q12894 506 aaPredicted RBP14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 U2AF1L4Q8WU68 220 aaKnown RBP14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 SUGT1Q9Y2Z0 365 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 WBP4O75554 376 aaKnown RBP14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 MTERF2Q49AM1 385 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 EFCAB13Q8IY85 973 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 VPS37BQ9H9H4 285 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 DAAM1Q9Y4D1 1078 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 CD163L1Q9NR16 1453 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 STAM2O75886 525 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 NDUFA8P51970 172 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 GEN1Q17RS7 908 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 MAP3K21Q5TCX8 1036 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 DACT3Q96B18 629 aaPredicted RBP14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 OPTNQ96CV9 577 aa14.44□□□□□ -0.1
RAPGEF1-201ENST00000372189 HOXD10P28358 340 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 SEPT2Q15019 361 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 PDCD2Q16342 344 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 TBC1D16Q8TBP0 767 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 GJA10Q969M2 543 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 HAUS1Q96CS2 278 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 OTUD5Q96G74 571 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 SH3GLB2Q9NR46 395 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 THEGQ9P2T0 379 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 CAMTA2O94983 1202 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 SLC39A14Q15043 492 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 METTL23Q86XA0 190 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 GRK7Q8WTQ7 553 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 FAM84BQ96KN1 310 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 ZFYVE1Q9HBF4 777 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 RAVER2Q9HCJ3 691 aaKnown RBP14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 ABCC12Q96J65 1359 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 MYO3AQ8NEV4 1616 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 PDXDC2PQ6P474 469 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 PLEKHA4Q9H4M7 779 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 RAP1GDS1P52306 607 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 IRX5P78411 483 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 SF3A3Q12874 501 aaKnown RBP eCLIP14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 RASIP1Q5U651 963 aa14.43□□□□□ -0.1
RAPGEF1-201ENST00000372189 FAM196BA6NMK8 535 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 CCT5P48643 541 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 SNRNP48Q6IEG0 339 aaKnown RBP14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 MICALL2Q8IY33 904 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 STXBP2Q15833 593 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 CCDC170Q8IYT3 715 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 PLA2G12BQ9BX93 195 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 DCP1AQ9NPI6 582 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 EPN1Q9Y6I3 576 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 MEIS1O00470 390 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 AP3B2Q13367 1082 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 RCSD1Q6JBY9 416 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 PPM1KQ8N3J5 372 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 NRBP1Q9UHY1 535 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 IQSEC2Q5JU85 1478 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 ZBTB5O15062 677 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 CCDC13Q8IYE1 715 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.42□□□□□ -0.15e-7■■■■■ 62
RAPGEF1-201ENST00000372189 TBC1D31Q96DN5 1066 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 YY1AP1Q9H869 796 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 CCDC159P0C7I6 412 aa14.42□□□□□ -0.1
RAPGEF1-201ENST00000372189 MYL7Q01449 175 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms