RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 RGL1Q9NZL6 768 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 GJA3Q9Y6H8 435 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 TADA3O75528 432 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 CLSTN1O94985 981 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 FAM13AO94988 1023 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 GCNT3O95395 438 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 ZBED6P86452 979 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 ADAM9Q13443 819 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 LRCH2Q5VUJ6 765 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 KRT26Q7Z3Y9 468 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 TBC1D5Q92609 795 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 LSM14BQ9BX40 385 aaKnown RBP18.82■□□□□ 0.6
VEGFA-205ENST00000372067 EMILIN3Q9NT22 766 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 ZNF70Q9UC06 446 aaPredicted RBP18.82■□□□□ 0.6
VEGFA-205ENST00000372067 CDC23Q9UJX2 597 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 CAPN11Q9UMQ6 739 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 MRFAP1Q9Y605 127 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 CETN3O15182 167 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 MED24O75448 989 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 CORO7P57737 925 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 HDLBPQ00341 1268 aaKnown RBP18.82■□□□□ 0.6
VEGFA-205ENST00000372067 FKBP3Q00688 224 aaKnown RBP18.82■□□□□ 0.6
VEGFA-205ENST00000372067 BIRC2Q13490 618 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 MYO3BQ8WXR4 1341 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 CALR3Q96L12 384 aaKnown RBP18.82■□□□□ 0.6
VEGFA-205ENST00000372067 CEP89Q96ST8 783 aa18.82■□□□□ 0.6
VEGFA-205ENST00000372067 MAST2Q6P0Q8 1798 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 A0A1W2PRG0 241 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 YDJCA8MPS7 323 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 GCOM1H8Y6P7 765 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-205ENST00000372067 FOSP01100 380 aaPredicted RBP18.81■□□□□ 0.6
VEGFA-205ENST00000372067 POLR2MP0CAP2 368 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 KAT2BQ92831 832 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 ARFGAP3Q9NP61 516 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 FBXO28Q9NVF7 368 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 A0A1W2PQC6 194 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 ENTPD3O75355 529 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 PRPF6O94906 941 aaKnown RBP18.81■□□□□ 0.6
VEGFA-205ENST00000372067 USP11P51784 963 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 JAG1P78504 1218 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 MAP3K9P80192 1104 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 AP3B2Q13367 1082 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 CHURC1Q8WUH1 139 aa18.81■□□□□ 0.6
VEGFA-205ENST00000372067 DPEP1P16444 411 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 RSBN1LQ6PCB5 846 aaPredicted RBP18.8■□□□□ 0.6
VEGFA-205ENST00000372067 HINFPQ9BQA5 517 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 HDAC6Q9UBN7 1215 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 PLIN4Q96Q06 1357 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 GAS7O60861 476 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 RPAINQ86UA6 219 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 MYCT1Q8N699 235 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 PPM1EQ8WY54 764 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 SPAG5Q96R06 1193 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 IFIH1Q9BYX4 1025 aaKnown RBP18.8■□□□□ 0.6
VEGFA-205ENST00000372067 ATF5Q9Y2D1 282 aaPredicted RBP18.8■□□□□ 0.6
VEGFA-205ENST00000372067 COL4A3BPQ9Y5P4 624 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 PPP1R12AO14974 1030 aaPredicted RBP18.8■□□□□ 0.6
VEGFA-205ENST00000372067 FANCGO15287 622 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 POLR2FP61218 127 aaKnown RBP18.8■□□□□ 0.6
VEGFA-205ENST00000372067 EXOC4Q96A65 974 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 HAUS4Q9H6D7 363 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 PCDHB13Q9Y5F0 798 aa18.8■□□□□ 0.6
VEGFA-205ENST00000372067 NKRFO15226 690 aaKnown RBP eCLIP18.79■□□□□ 0.64e-7■□□□□ 10.1
VEGFA-205ENST00000372067 CLIC2O15247 247 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 SRGAP2O75044 1071 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 PLEKP08567 350 aaPredicted RBP18.79■□□□□ 0.6
VEGFA-205ENST00000372067 PSMC6P62333 389 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 LRRC63Q05C16 580 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 EHMT1Q9H9B1 1298 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 PSD3Q9NYI0 1048 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 ZNF831Q5JPB2 1677 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 NR2F2P24468 414 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 EIF4A3P38919 411 aaKnown RBP18.79■□□□□ 0.6
VEGFA-205ENST00000372067 SFR1Q86XK3 245 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 CDAN1Q8IWY9 1227 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 MYO6Q9UM54 1294 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 MEIS2O14770 477 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 ZBTB7AO95365 584 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 MAGEA1P43355 309 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 PSMD2Q13200 908 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 CCDC181Q5TID7 509 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 SRGAP1Q7Z6B7 1085 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 PARD6BQ9BYG5 372 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 RABGAP1Q9Y3P9 1069 aa18.79■□□□□ 0.6
VEGFA-205ENST00000372067 CPP00450 1065 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 ALAS1P13196 640 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 CENPPQ6IPU0 288 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 CATSPER3Q86XQ3 398 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 RTKN2Q8IZC4 609 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 PLEKHA4Q9H4M7 779 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 SPDYE2BA6NHP3 402 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 SPDYE6P0CI01 402 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 RRP1BQ14684 758 aaKnown RBP18.78■□□□□ 0.6
VEGFA-205ENST00000372067 ZNF341Q9BYN7 854 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 LY75O60449 1722 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 LRRC53A6NM62 1247 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 FAM86B1E9PN63 330 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 FAM86B2P0C5J1 330 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 C11orf91Q3C1V1 193 aa18.78■□□□□ 0.6
VEGFA-205ENST00000372067 SYCP3Q8IZU3 236 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms