RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 CLTBP09497 229 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 ACTR2P61160 394 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 SETQ01105 290 aaPredicted RBP14.28□□□□□ -0.12
SNCG-202ENST00000372017 TRIM29Q14134 588 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 MFSD10Q14728 455 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 KIAA0753Q2KHM9 967 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 GDF6Q6KF10 455 aaPredicted RBP14.28□□□□□ -0.12
SNCG-202ENST00000372017 NEK8Q86SG6 692 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 ETNPPLQ8TBG4 499 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 SEPT1Q8WYJ6 367 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 SLC5A5Q92911 643 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 SNX21Q969T3 373 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 JPH1Q9HDC5 661 aaPredicted RBP14.28□□□□□ -0.12
SNCG-202ENST00000372017 HDAC6Q9UBN7 1215 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 TBX21Q9UL17 535 aa14.28□□□□□ -0.12
SNCG-202ENST00000372017 UMODL1Q5DID0 1318 aa14.27□□□□□ -0.12
SNCG-202ENST00000372017 H3BRB1 525 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 K7ELQ4 463 aaPredicted RBP14.27□□□□□ -0.13
SNCG-202ENST00000372017 LGR5O75473 907 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 PSMD10O75832 226 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 ZNF200P98182 395 aaPredicted RBP14.27□□□□□ -0.13
SNCG-202ENST00000372017 FAM47CQ5HY64 1035 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 PPP4R3AQ6IN85 833 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 NFRKBQ6P4R8 1299 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 MOXD1Q6UVY6 613 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 ABHD15Q6UXT9 468 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 SLC17A8Q8NDX2 589 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 SDF4Q9BRK5 362 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 RNPEPQ9H4A4 650 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 TUT1Q9H6E5 874 aaKnown RBP14.27□□□□□ -0.13
SNCG-202ENST00000372017 BRMS1Q9HCU9 246 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 PRDM5Q9NQX1 630 aaPredicted RBP14.27□□□□□ -0.13
SNCG-202ENST00000372017 SMC3Q9UQE7 1217 aa14.27□□□□□ -0.13
SNCG-202ENST00000372017 MROH7Q68CQ1 1323 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 IGKV6D-21A0A0A0MT36 114 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 DCDC2CA8MYV0 355 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 KIAA0355O15063 1070 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 CCNT1O60563 726 aaKnown RBP14.26□□□□□ -0.13
SNCG-202ENST00000372017 CYP2C9P11712 490 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 B3GNT9Q6UX72 402 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 SESTD1Q86VW0 696 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 POTEDQ86YR6 584 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 HAS1Q92839 578 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 GDF15Q99988 308 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 FOXP1Q9H334 677 aaPredicted RBP14.26□□□□□ -0.13
SNCG-202ENST00000372017 PRO3102Q9H379 93 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 UNC45AQ9H3U1 944 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 KCNMB3Q9NPA1 279 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 FOXD4L1Q9NU39 408 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 TMEM39AQ9NV64 488 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 DDX25Q9UHL0 483 aaKnown RBP14.26□□□□□ -0.13
SNCG-202ENST00000372017 GTF2IRD1Q9UHL9 959 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 COL6A3P12111 3177 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 LAMA3Q16787 3333 aa14.26□□□□□ -0.13
SNCG-202ENST00000372017 EMSYQ7Z589 1322 aa14.25□□□□□ -0.13
SNCG-202ENST00000372017 ATP4AP20648 1035 aa14.25□□□□□ -0.13
SNCG-202ENST00000372017 U2AF2P26368 475 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNCG-202ENST00000372017 HOXC8P31273 242 aa14.25□□□□□ -0.13
SNCG-202ENST00000372017 MAGEA10P43363 369 aaPredicted RBP14.25□□□□□ -0.13
SNCG-202ENST00000372017 TOB1P50616 345 aaPredicted RBP14.25□□□□□ -0.13
SNCG-202ENST00000372017 MDM2Q00987 491 aaPredicted RBP14.25□□□□□ -0.13
SNCG-202ENST00000372017 PTPN11Q06124 597 aaPredicted RBP14.25□□□□□ -0.13
SNCG-202ENST00000372017 CCDC60Q8IWA6 550 aaPredicted RBP14.25□□□□□ -0.13
SNCG-202ENST00000372017 BADQ92934 168 aa14.25□□□□□ -0.13
SNCG-202ENST00000372017 WNT8BQ93098 351 aa14.25□□□□□ -0.13
SNCG-202ENST00000372017 KATNAL1Q9BW62 490 aa14.25□□□□□ -0.13
SNCG-202ENST00000372017 TBC1D22BQ9NU19 505 aa14.25□□□□□ -0.13
SNCG-202ENST00000372017 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.25□□□□□ -0.13
SNCG-202ENST00000372017 SUPT20HL2P0C7V6 817 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 SMIM10L2AP0DMW4 78 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 SMIM10L2BP0DMW5 78 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 MARK3P27448 753 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 NBR1Q14596 966 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 SAFBQ15424 915 aaKnown RBP eCLIP14.24□□□□□ -0.13
SNCG-202ENST00000372017 LRCH2Q5VUJ6 765 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 DHX38Q92620 1227 aaKnown RBP14.24□□□□□ -0.13
SNCG-202ENST00000372017 VWCEQ96DN2 955 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 RIT2Q99578 217 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 SEZ6LQ9BYH1 1024 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 PPP1R12CQ9BZL4 782 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 TMEM60Q9H2L4 133 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 VAV3Q9UKW4 847 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 SCN5AQ14524 2016 aa14.24□□□□□ -0.13
SNCG-202ENST00000372017 DLL1O00548 723 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 TLR3O15455 904 aaKnown RBP14.23□□□□□ -0.13
SNCG-202ENST00000372017 CHMP2AO43633 222 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 GAS7O60861 476 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 TIMP1P01033 207 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 GCFC2P16383 781 aaKnown RBP14.23□□□□□ -0.13
SNCG-202ENST00000372017 ATP2B1P20020 1258 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 CYP2C18P33260 490 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 EPHB4P54760 987 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 ADAM17P78536 824 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 PLCB4Q15147 1175 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 PTGISQ16647 500 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 LARP1BQ659C4 914 aaKnown RBP14.23□□□□□ -0.13
SNCG-202ENST00000372017 ZNF746Q6NUN9 644 aaPredicted RBP14.23□□□□□ -0.13
SNCG-202ENST00000372017 SWSAP1Q6NVH7 229 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 NOSTRINQ8IVI9 506 aa14.23□□□□□ -0.13
SNCG-202ENST00000372017 C7orf31Q8N865 590 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms