RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 RAB30Q15771 203 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 PFKFB3Q16875 520 aaPredicted RBP12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 NLRX1Q86UT6 975 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 CRYGNQ8WXF5 182 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 PHKBQ93100 1093 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 MXRA8Q9BRK3 442 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 ANO3Q9BYT9 981 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 NCOA5Q9HCD5 579 aaKnown RBP12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 MSRAQ9UJ68 235 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 NAP1L2Q9ULW6 460 aaPredicted RBP12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 PCDHA11Q9Y5I1 949 aa12.59□□□□□ -0.39
EXOSC1-202ENST00000370885 SIP14410 1827 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 LCHNA4D1U4 455 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 SPDYE3A6NKU9 549 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 DTNBO60941 627 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 CA3P07451 260 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 PDIA3P30101 505 aaKnown RBP12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 TCF7P36402 384 aaPredicted RBP12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 ADCY7P51828 1080 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 EVCP57679 992 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 WDR5P61964 334 aaKnown RBP12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 MTMR1Q13613 665 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 JAKMIP3Q5VZ66 844 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 RUFY4Q6ZNE9 571 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 HERC6Q8IVU3 1022 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 LMBR1Q8WVP7 490 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 ATP6V0A1Q93050 837 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 UIMC1Q96RL1 719 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 MTIF3Q9H2K0 278 aaKnown RBP12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 CERS4Q9HA82 394 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 SLC28A3Q9HAS3 691 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 KCNH7Q9NS40 1196 aa12.58□□□□□ -0.4
EXOSC1-202ENST00000370885 FAM86B1E9PN63 330 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 MEIS1O00470 390 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 DLL1O00548 723 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 PRPF3O43395 683 aaKnown RBP12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 FAM86B2P0C5J1 330 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 SCG2P13521 617 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 MARK3P27448 753 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 SREBF1P36956 1147 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 THPOP40225 353 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 CCT2P78371 535 aaKnown RBP12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 MARCH8Q5T0T0 291 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 CCDC155Q8N6L0 562 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 ZSWIM6Q9HCJ5 1215 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 MUC3AQ02505 3323 aa12.57□□□□□ -0.4
EXOSC1-202ENST00000370885 MICAL3Q7RTP6 2002 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 IGLV3-22A0A075B6J6 115 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 RSPH10B2B2RC85 870 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 LGR5O75473 907 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 REC8O95072 547 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 CCNE2O96020 404 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 CTSHP09668 335 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 RSPH10BP0C881 870 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 ACTN1P12814 892 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 FGD1P98174 961 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 TAP1Q03518 808 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 PPP2R2DQ66LE6 453 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 KRT40Q6A162 431 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 CNKSR3Q6P9H4 555 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 RUFY3Q7L099 469 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 DBF4BQ8NFT6 615 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 PHOSPHO2Q8TCD6 241 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 RASGRP4Q8TDF6 673 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 SEPT1Q8WYJ6 367 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 SLC9A7Q96T83 725 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 UPF3BQ9BZI7 483 aaKnown RBP12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 ZMYND12Q9H0C1 365 aa12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 AGO4Q9HCK5 861 aaKnown RBP12.56□□□□□ -0.4
EXOSC1-202ENST00000370885 KAT6AQ92794 2004 aa12.55□□□□□ -0.4
EXOSC1-202ENST00000370885 hCG_1984214I3L0E3 225 aa12.55□□□□□ -0.4
EXOSC1-202ENST00000370885 DHX15O43143 795 aaKnown RBP12.55□□□□□ -0.4
EXOSC1-202ENST00000370885 BAIAP3O94812 1187 aa12.55□□□□□ -0.4
EXOSC1-202ENST00000370885 CHRNA1P02708 482 aa12.55□□□□□ -0.4
EXOSC1-202ENST00000370885 ARHGAP4P98171 946 aa12.55□□□□□ -0.4
EXOSC1-202ENST00000370885 CEP55Q53EZ4 464 aa12.55□□□□□ -0.4
EXOSC1-202ENST00000370885 PLEKHG4Q58EX7 1191 aa12.55□□□□□ -0.4
EXOSC1-202ENST00000370885 ZNF713Q8N859 430 aaPredicted RBP12.55□□□□□ -0.4
EXOSC1-202ENST00000370885 PPM1EQ8WY54 764 aa12.55□□□□□ -0.4
EXOSC1-202ENST00000370885 PRRC2BQ5JSZ5 2229 aaKnown RBP12.55□□□□□ -0.4
EXOSC1-202ENST00000370885 ESYT2A0FGR8 921 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 MAFGO15525 162 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 LPXNO60711 386 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 ATG7O95352 703 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 FOSP01100 380 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 IFNAR1P17181 557 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 ACTR2P61160 394 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 MGAT3Q09327 533 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 AP3B2Q13367 1082 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 CCDC85BQ15834 202 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 FAM26DQ5JW98 314 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 FAM117BQ6P1L5 589 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 GIMAP8Q8ND71 665 aaPredicted RBP12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 TRAPPC12Q8WVT3 735 aa12.54□□□□□ -0.4
EXOSC1-202ENST00000370885 CDHR1Q96JP9 859 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms