RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 THRAP3Q9Y2W1 955 aaKnown RBP11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 MYMKA6NI61 221 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 SFI1A8K8P3 1242 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 CETN3O15182 167 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 H2AFZP0C0S5 128 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 PSEN1P49768 467 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 SKOR1P84550 965 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 SEPT7Q16181 437 aaKnown RBP11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 PFKFB3Q16875 520 aaPredicted RBP11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 TBC1D10BQ4KMP7 808 aaPredicted RBP11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 FAM26FQ5R3K3 315 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 H2AFVQ71UI9 128 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 HOOK3Q86VS8 718 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 ELOA2Q8IYF1 753 aaPredicted RBP11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 CNOT8Q9UFF9 292 aaKnown RBP11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 AMFRQ9UKV5 643 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 DAAM1Q9Y4D1 1078 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 ABCC12Q96J65 1359 aa11.36□□□□□ -0.59
PRPF38B-201ENST00000370021 RHOBTB3O94955 611 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 SERPING1P05155 500 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 PPP2R5BQ15173 497 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 NAALADL2Q58DX5 795 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 PDXDC1Q6P996 788 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 NEK8Q86SG6 692 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 MSL3Q8N5Y2 521 aaKnown RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 SAAL1Q96ER3 474 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 CTTNBP2NLQ9P2B4 639 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 KIAA1024Q9UPX6 916 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 IL2RBP14784 551 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 SLC9A1P19634 815 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 NR2F2P24468 414 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 PRDX5P30044 214 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 CYP4A11Q02928 519 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 ZNF844Q08AG5 666 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 ITGB3BPQ13352 177 aaPredicted RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 MTMR3Q13615 1198 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 GLE1Q53GS7 698 aaKnown RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 HP1BP3Q5SSJ5 553 aaPredicted RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 GJB7Q6PEY0 223 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 REXO1Q8N1G1 1221 aaKnown RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 TAB3Q8N5C8 712 aaPredicted RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 FBF1Q8TES7 1133 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 TMBIM4Q9HC24 238 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 COL4A3BPQ9Y5P4 624 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 ZC3H4Q9UPT8 1303 aaKnown RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 TCRBV5S4A2TA0A5A2 114 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 TRAPPC10P48553 1259 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 POLE2P56282 527 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 GSCP56915 257 aaPredicted RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 MXRA7P84157 204 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 FKBP3Q00688 224 aaKnown RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 KCNB1Q14721 858 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 ALX1Q15699 326 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 PREPLQ4J6C6 727 aaPredicted RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 LRP10Q7Z4F1 713 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 USP38Q8NB14 1042 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 CUL5Q93034 780 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 XPO6Q96QU8 1125 aaKnown RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 PIGSQ96S52 555 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 DDX23Q9BUQ8 820 aaKnown RBP11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 ZMYND12Q9H0C1 365 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 INTUQ9ULD6 942 aa11.35□□□□□ -0.59
PRPF38B-201ENST00000370021 MAP3K15Q6ZN16 1313 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 MROH5Q6ZUA9 1318 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 FOXO6A8MYZ6 492 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 GNA11P29992 359 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 FNTAP49354 379 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 IFI35P80217 286 aaPredicted RBP11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 UBE2SQ16763 222 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 ARL6IP4Q66PJ3 421 aaKnown RBP11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 INTS8Q75QN2 995 aaKnown RBP11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 ARMC2Q8NEN0 867 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 LMBR1Q8WVP7 490 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 ECT2Q9H8V3 914 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 FGFR1OP2Q9NVK5 253 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 ASIC3Q9UHC3 531 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 CCT8L1PA6NM43 557 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 E9PMD0 336 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 HIP1RO75146 1068 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 FLOT1O75955 427 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 TDP2O95551 362 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 STX2P32856 288 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 SATB1Q01826 763 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 SEC23AQ15436 765 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 MEA1Q16626 185 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 EAPPQ56P03 285 aaPredicted RBP11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 RFX8Q6ZV50 586 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 GPBP1Q86WP2 473 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 METTL13Q8N6R0 699 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 KIAA0895Q8NCT3 520 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 MTRF1LQ9UGC7 380 aaKnown RBP11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 C5P01031 1676 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 ZNF76P36508 570 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 PTK2Q05397 1052 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 DIXDC1Q155Q3 683 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 MIIPQ5JXC2 388 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 SUSD4Q5VX71 490 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 PPP4R3AQ6IN85 833 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 LONP2Q86WA8 852 aa11.34□□□□□ -0.59
PRPF38B-201ENST00000370021 ARHGEF2Q92974 986 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms