RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 EPHB4P54760 987 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 UBE2HP62256 183 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 PURAQ00577 322 aaKnown RBP7.72□□□□□ -1.17
CSDE1-204ENST00000369530 PDE4BQ07343 736 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 TBC1D8BQ0IIM8 1120 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 PGM5Q15124 567 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 LRRC47Q8N1G4 583 aaKnown RBP7.72□□□□□ -1.17
CSDE1-204ENST00000369530 MICALL1Q8N3F8 863 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 AFAP1L1Q8TED9 768 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 C16orf45Q96MC5 204 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-204ENST00000369530 SEZ6LQ9BYH1 1024 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 MYH11P35749 1972 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 NFASCO94856 1347 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 DNAH14Q0VDD8 3507 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 ZBTB5O15062 677 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 CASTP20810 708 aaKnown RBP7.72□□□□□ -1.17
CSDE1-204ENST00000369530 PLCB2Q00722 1185 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 TRAF1Q13077 416 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 LRRFIP1Q32MZ4 808 aaKnown RBP7.72□□□□□ -1.17
CSDE1-204ENST00000369530 PNMA1Q8ND90 353 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 SP7Q8TDD2 431 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-204ENST00000369530 TCEANC2Q96MN5 208 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 BCAS3Q9H6U6 928 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 VTA1Q9NP79 307 aa7.72□□□□□ -1.17
CSDE1-204ENST00000369530 H0YHG0 523 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 SASH3O75995 380 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 PLEKHA8P1O95397 391 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 ATP4AP20648 1035 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 STAT3P40763 770 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 CD151P48509 253 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 SARNPP82979 210 aaKnown RBP7.71□□□□□ -1.17
CSDE1-204ENST00000369530 PPP2R5AQ15172 486 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 QRICH1Q2TAL8 776 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 DUSP28Q4G0W2 176 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 PREPLQ4J6C6 727 aaPredicted RBP7.71□□□□□ -1.17
CSDE1-204ENST00000369530 PRPF38BQ5VTL8 546 aaKnown RBP7.71□□□□□ -1.17
CSDE1-204ENST00000369530 PCNX4Q63HM2 1172 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 LEKR1Q6ZMV7 388 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 FAM200AQ8TCP9 573 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 HNRNPLLQ8WVV9 542 aaKnown RBP7.71□□□□□ -1.17
CSDE1-204ENST00000369530 WNT8BQ93098 351 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 ZNF274Q96GC6 653 aaPredicted RBP7.71□□□□□ -1.17
CSDE1-204ENST00000369530 NAPBQ9H115 298 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 PHLPP2Q6ZVD8 1323 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 EMSYQ7Z589 1322 aa7.71□□□□□ -1.17
CSDE1-204ENST00000369530 EVPLQ92817 2033 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 F2P00734 622 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 ZNF75DP51815 510 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 PTPN11Q06124 597 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-204ENST00000369530 SMC1AQ14683 1233 aaKnown RBP7.71□□□□□ -1.18
CSDE1-204ENST00000369530 MBTPS1Q14703 1052 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 TMCO3Q6UWJ1 677 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 CCDC144CPQ8IYA2 1237 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 TMX3Q96JJ7 454 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 NYNRINQ9P2P1 1898 aaKnown RBP7.71□□□□□ -1.18
CSDE1-204ENST00000369530 POLR3DP05423 398 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-204ENST00000369530 ELF1P32519 619 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 RUFY3Q7L099 469 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 ARMCX2Q7L311 632 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 MAGEC3Q8TD91 643 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 NUDT12Q9BQG2 462 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 NUCKS1Q9H1E3 243 aaKnown RBP7.71□□□□□ -1.18
CSDE1-204ENST00000369530 PRDM16Q9HAZ2 1276 aa7.71□□□□□ -1.18
CSDE1-204ENST00000369530 WNT7AO00755 349 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 TADA3O75528 432 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 LARGE1O95461 756 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 CAVIN2O95810 425 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 PRKAR2AP13861 404 aaKnown RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 PDIA3P30101 505 aaKnown RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 MAGEA8P43361 318 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 PDIA5Q14554 519 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 PFKFB3Q16875 520 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 CC2D1AQ6P1N0 951 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 KCTD1Q719H9 257 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 CCDC26Q8TAB7 109 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 ETNPPLQ8TBG4 499 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 PAIP2Q9BPZ3 127 aaKnown RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 PHF20Q9BVI0 1012 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 FUT8Q9BYC5 575 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 BARHL2Q9NY43 387 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 IGSF9BQ9UPX0 1349 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 PNMA6FA0A0J9YX94 578 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 A0A1W2PQ45 241 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 A0A1W2PQY0 241 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 EFCAB8A8MWE9 144 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 ITGB5P18084 799 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 HNRNPH1P31943 449 aaKnown RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 RWDD2BP57060 319 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 NEDD9Q14511 834 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 E2F4Q16254 413 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 CCAR2Q8N163 923 aaKnown RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 ZNF483Q8TF39 744 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 MRFAP1L1Q96HT8 127 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 SH3GL3Q99963 347 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 SLX1AQ9BQ83 275 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 MMTAG2Q9BU76 263 aaKnown RBP7.7□□□□□ -1.18
CSDE1-204ENST00000369530 SH3GLB2Q9NR46 395 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.7□□□□□ -1.184e-11■□□□□ 9.7
CSDE1-204ENST00000369530 BPTFQ12830 3046 aa7.7□□□□□ -1.18
CSDE1-204ENST00000369530 IGKV6-21A0A0C4DH24 114 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms