RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 UBA1P22314 1058 aaKnown RBP13.79□□□□□ -0.2
TUBE1-202ENST00000368662 AMPD3Q01432 767 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 MAP2K1Q02750 393 aaPredicted RBP13.79□□□□□ -0.2
TUBE1-202ENST00000368662 POSTNQ15063 836 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 NAALADL2Q58DX5 795 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 PDXDC2PQ6P474 469 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 TRIM47Q96LD4 638 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 PNMA5Q96PV4 448 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 LRRC27Q9C0I9 530 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 PCDHA10Q9Y5I2 948 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 PCNTO95613 3336 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 MED24O75448 989 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 GNRH1P01148 92 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 P4HBP07237 508 aaKnown RBP13.79□□□□□ -0.2
TUBE1-202ENST00000368662 SPATA31C1P0DKV0 1188 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 ZNF445P59923 1031 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 C1QTNF8P60827 252 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 ARHGEF6Q15052 776 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 METTL7BQ6UX53 244 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 SH3RF1Q7Z6J0 888 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 LARP4BQ92615 738 aaKnown RBP13.79□□□□□ -0.2
TUBE1-202ENST00000368662 PAGE5Q96GU1 130 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 DDX41Q9UJV9 622 aaKnown RBP13.79□□□□□ -0.2
TUBE1-202ENST00000368662 KIAA1024Q9UPX6 916 aa13.79□□□□□ -0.2
TUBE1-202ENST00000368662 MGAMO43451 1857 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 RBM47A0AV96 593 aaKnown RBP13.78□□□□□ -0.2
TUBE1-202ENST00000368662 POTEB3A0JP26 581 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 DKC1O60832 514 aaKnown RBP eCLIP13.78□□□□□ -0.2
TUBE1-202ENST00000368662 ECM2O94769 699 aaPredicted RBP13.78□□□□□ -0.2
TUBE1-202ENST00000368662 SLITRK3O94933 977 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 SNAI1O95863 264 aaPredicted RBP13.78□□□□□ -0.2
TUBE1-202ENST00000368662 CYP2B6P20813 491 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 HOXD10P28358 340 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 CTGFP29279 349 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 MDM2Q00987 491 aaPredicted RBP13.78□□□□□ -0.2
TUBE1-202ENST00000368662 SP2Q02086 613 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 CCDC62Q6P9F0 684 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 POTEBQ6S5H4 581 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 SV2BQ7L1I2 683 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 CYFIP1Q7L576 1253 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 CKAP2LQ8IYA6 745 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 TRMT44Q8IYL2 757 aaKnown RBP13.78□□□□□ -0.2
TUBE1-202ENST00000368662 RAD54LQ92698 747 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 PLIN2Q99541 437 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 BEGAINQ9BUH8 593 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 KBTBD4Q9NVX7 518 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 DNM3Q9UQ16 869 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 DOCK3Q8IZD9 2030 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 GPR25O00155 361 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 FARP2O94887 1054 aaPredicted RBP13.78□□□□□ -0.2
TUBE1-202ENST00000368662 SMC2O95347 1197 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 CCNE2O96020 404 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 PSAPP07602 524 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 TXNP10599 105 aaKnown RBP13.78□□□□□ -0.2
TUBE1-202ENST00000368662 CYP4A11Q02928 519 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 ACVR2BQ13705 512 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 TAPT1Q6NXT6 567 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 MIS18BP1Q6P0N0 1132 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 DYDC2Q96IM9 177 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 KATNBL1Q9H079 304 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 ZSWIM4Q9H7M6 989 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 MLXIPQ9HAP2 919 aa13.78□□□□□ -0.2
TUBE1-202ENST00000368662 NKRFO15226 690 aaKnown RBP eCLIP13.77□□□□□ -0.21
TUBE1-202ENST00000368662 MCM3APO60318 1980 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 GGPS1O95749 300 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 QARSP47897 775 aaKnown RBP13.77□□□□□ -0.21
TUBE1-202ENST00000368662 ACTR2P61160 394 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 ECM1Q16610 540 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 LY6KQ17RY6 165 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 SASS6Q6UVJ0 657 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 LRSAM1Q6UWE0 723 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 TPH2Q8IWU9 490 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 ERO1AQ96HE7 468 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 NACC1Q96RE7 527 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 LXNQ9BS40 222 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 ARHGAP39Q9C0H5 1083 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 BLOC1S4Q9NUP1 217 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 NRBP1Q9UHY1 535 aa13.77□□□□□ -0.21
TUBE1-202ENST00000368662 POTEFA5A3E0 1075 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 GTPBP6O43824 516 aaPredicted RBP13.76□□□□□ -0.21
TUBE1-202ENST00000368662 ARIH2O95376 493 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 CCDC192P0DO97 292 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 AFMP43652 599 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 PSMC5P62195 406 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 PNOCQ13519 176 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 CELF3Q5SZQ8 465 aaKnown RBP13.76□□□□□ -0.21
TUBE1-202ENST00000368662 IQSEC1Q6DN90 963 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 POTEGQ6S5H5 508 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 DHX37Q8IY37 1157 aaKnown RBP13.76□□□□□ -0.21
TUBE1-202ENST00000368662 ATP6V0A1Q93050 837 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 RGL1Q9NZL6 768 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 FKTNO75072 461 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 ATG7O95352 703 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 LYPLA2O95372 231 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 FLT3LGP49771 235 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 LAMC2Q13753 1193 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 CTTNQ14247 550 aaKnown RBP13.76□□□□□ -0.21
TUBE1-202ENST00000368662 NT5DC1Q5TFE4 455 aa13.76□□□□□ -0.21
TUBE1-202ENST00000368662 ABHD15Q6UXT9 468 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms