RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 ARRDC4Q8NCT1 418 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 COPS5Q92905 334 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 TRMT2BQ96GJ1 504 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 NBPF4Q96M43 638 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 PLEKHG4BQ96PX9 1271 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 ST7Q9NRC1 585 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 TMEFF2Q9UIK5 374 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 PCDHB4Q9Y5E5 795 aa5.29□□□□□ -1.56
ECHDC1-201ENST00000368287 B2RBV5 119 aa5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 PLSCR1O15162 318 aa5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 COL6A1P12109 1028 aa5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 ACO1P21399 889 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 RAB33AQ14088 237 aa5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 EEPD1Q7L9B9 569 aa5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 GPR155Q7Z3F1 870 aa5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 MRGPRGQ86SM5 289 aa5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 FUKQ8N0W3 1084 aa5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 KLHL6Q8WZ60 621 aa5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 COA3Q9Y2R0 106 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 TIMM13Q9Y5L4 95 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 X6R8D5 127 aa5.28□□□□□ -1.56
ECHDC1-201ENST00000368287 TCRBV5S2A0A599 114 aa5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 NOP56O00567 594 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 HGSO14964 777 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 KLHL18O94889 574 aa5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 LRG1P02750 347 aa5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 CSRP2Q16527 193 aa5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 DDR2Q16832 855 aa5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 Q8N1Y9 231 aa5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 CRACR2BQ8N4Y2 399 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 PPP1R14AQ96A00 147 aa5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 AGAP2Q99490 1192 aa5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 OSBPL2Q9H1P3 480 aa5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 WASF3Q9UPY6 502 aa5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 AKT3Q9Y243 479 aa5.27□□□□□ -1.57
ECHDC1-201ENST00000368287 FAM221BA6H8Z2 402 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 AGRPO00253 132 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 KCNH1O95259 989 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 GJB6O95452 261 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 CSF2RBP32927 897 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 TUBA3CQ13748 450 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 BMS1Q14692 1282 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 ZNF568Q3ZCX4 644 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 SV2CQ496J9 727 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 MRM1Q6IN84 353 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 GIMAP6Q6P9H5 292 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 TUBA3EQ6PEY2 450 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 POMZP3Q6PJE2 187 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 CACTINQ8WUQ7 758 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 LARP4BQ92615 738 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 NEIL1Q96FI4 390 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 AJUBAQ96IF1 538 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 EPN3Q9H201 632 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 ZSWIM4Q9H7M6 989 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 MMRN2Q9H8L6 949 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 SIRPGQ9P1W8 387 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 LRP2BPQ9P2M1 347 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 DMRT1Q9Y5R6 373 aa5.26□□□□□ -1.57
ECHDC1-201ENST00000368287 MYO1BO43795 1136 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 RAD17O75943 681 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 MAKP20794 623 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 BCL6P41182 706 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 GTF2A2P52657 109 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 SMAD2Q15796 467 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 LRCH2Q5VUJ6 765 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 STEAP3Q658P3 488 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 IQCEQ6IPM2 695 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 NLRP10Q86W26 655 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 IL17DQ8TAD2 202 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 ZNF483Q8TF39 744 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 FAM89AQ96GI7 184 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 TMEM169Q96HH4 297 aa5.25□□□□□ -1.57
ECHDC1-201ENST00000368287 CCDC85CA6NKD9 419 aa5.24□□□□□ -1.57
ECHDC1-201ENST00000368287 SUSD5O60279 629 aa5.24□□□□□ -1.57
ECHDC1-201ENST00000368287 IL12RB1P42701 662 aa5.24□□□□□ -1.57
ECHDC1-201ENST00000368287 RASA3Q14644 834 aa5.24□□□□□ -1.57
ECHDC1-201ENST00000368287 PHF19Q5T6S3 580 aa5.24□□□□□ -1.57
ECHDC1-201ENST00000368287 Q6ZSN1 163 aa5.24□□□□□ -1.57
ECHDC1-201ENST00000368287 POLNQ7Z5Q5 900 aa5.24□□□□□ -1.57
ECHDC1-201ENST00000368287 BVESQ8NE79 360 aa5.24□□□□□ -1.57
ECHDC1-201ENST00000368287 SNTG2Q9NY99 539 aa5.24□□□□□ -1.57
ECHDC1-201ENST00000368287 RBPJLQ9UBG7 517 aa5.24□□□□□ -1.57
ECHDC1-201ENST00000368287 CDK11AQ9UQ88 783 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-201ENST00000368287 IQCA1LA6NCM1 817 aa5.23□□□□□ -1.57
ECHDC1-201ENST00000368287 FBXO21O94952 628 aa5.23□□□□□ -1.57
ECHDC1-201ENST00000368287 CHGBP05060 677 aa5.23□□□□□ -1.57
ECHDC1-201ENST00000368287 ACRV1P26436 265 aa5.23□□□□□ -1.57
ECHDC1-201ENST00000368287 RAC3P60763 192 aa5.23□□□□□ -1.57
ECHDC1-201ENST00000368287 FNDC7Q5VTL7 733 aa5.23□□□□□ -1.57
ECHDC1-201ENST00000368287 VASNQ6EMK4 673 aa5.23□□□□□ -1.57
ECHDC1-201ENST00000368287 REXO1L1PQ8IX06 675 aa5.23□□□□□ -1.57
ECHDC1-201ENST00000368287 CCDC113Q9H0I3 377 aa5.23□□□□□ -1.57
ECHDC1-201ENST00000368287 MSRB2Q9Y3D2 182 aa5.23□□□□□ -1.57
ECHDC1-201ENST00000368287 RAMP2O60895 175 aa5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 TADA3O75528 432 aa5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 USP10Q14694 798 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 EMC4Q5J8M3 183 aa5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 LRP10Q7Z4F1 713 aa5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 DTX3Q8N9I9 347 aa5.22□□□□□ -1.57
ECHDC1-201ENST00000368287 ST13P5Q8NFI4 369 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms