RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 BATF3Q9NR55 127 aa14.41□□□□□ -0.1
PTPRK-204ENST00000368210 PARVGQ9HBI0 331 aa14.41□□□□□ -0.1
PTPRK-204ENST00000368210 CYP27A1Q02318 531 aa14.41□□□□□ -0.1
PTPRK-204ENST00000368210 NFIXQ14938 502 aa14.41□□□□□ -0.1
PTPRK-204ENST00000368210 ADAT2Q7Z6V5 191 aaKnown RBP14.41□□□□□ -0.1
PTPRK-204ENST00000368210 FAM160B2Q86V87 743 aa14.41□□□□□ -0.1
PTPRK-204ENST00000368210 MB21D1Q8N884 522 aa14.41□□□□□ -0.1
PTPRK-204ENST00000368210 SLC17A8Q8NDX2 589 aa14.41□□□□□ -0.1
PTPRK-204ENST00000368210 ZNF512BQ96KM6 892 aaPredicted RBP14.41□□□□□ -0.1
PTPRK-204ENST00000368210 NT5C1BQ96P26 610 aa14.41□□□□□ -0.1
PTPRK-204ENST00000368210 BHMT2Q9H2M3 363 aa14.41□□□□□ -0.1
PTPRK-204ENST00000368210 TRIM66O15016 1216 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 EIF4A3P38919 411 aaKnown RBP14.4□□□□□ -0.1
PTPRK-204ENST00000368210 PPP1R21Q6ZMI0 780 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 TTC16Q8NEE8 873 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 NHEJ1Q9H9Q4 299 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-204ENST00000368210 NOP53Q9NZM5 478 aaKnown RBP14.4□□□□□ -0.1
PTPRK-204ENST00000368210 TAF6LQ9Y6J9 622 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 GUCY2DQ02846 1103 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 AP3B2Q13367 1082 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 SF3B3Q15393 1217 aaKnown RBP14.4□□□□□ -0.1
PTPRK-204ENST00000368210 ARMC9Q7Z3E5 817 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 NSUN4Q96CB9 384 aaKnown RBP14.4□□□□□ -0.1
PTPRK-204ENST00000368210 DPH5Q9H2P9 285 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 PLCB1Q9NQ66 1216 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 DAPK3O43293 454 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 GUCY1A2P33402 732 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 ARHGAP27Q6ZUM4 889 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 UNC13DQ70J99 1090 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 ACCSQ96QU6 501 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 POTEMA6NI47 508 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 IFNB1P01574 187 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 TAF11Q15544 211 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 FAM133AQ8N9E0 248 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 IGDCC4Q8TDY8 1250 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 DCAF4Q8WV16 495 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 RNF34Q969K3 372 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 BARHL2Q9NY43 387 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 SEPT9Q9UHD8 586 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-204ENST00000368210 PREX1Q8TCU6 1659 aa14.4□□□□□ -0.1
PTPRK-204ENST00000368210 PABPN1LA6NDY0 278 aaKnown RBP14.39□□□□□ -0.11
PTPRK-204ENST00000368210 TNNC2P02585 160 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 DDIT3P35638 169 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 EAPPQ56P03 285 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-204ENST00000368210 TTLL6Q8N841 843 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 SLC7A3Q8WY07 619 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-204ENST00000368210 ANKFY1Q9P2R3 1169 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 SSX2IPQ9Y2D8 614 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 CAMTA2O94983 1202 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 MFAP3P55082 362 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 SNAP25P60880 206 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 PTK2Q05397 1052 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 OSBPL5Q9H0X9 879 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-204ENST00000368210 TMEM206Q9H813 350 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 TMEM191BP0C7N4 346 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 CA8P35219 290 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 NSFP46459 744 aaKnown RBP14.39□□□□□ -0.11
PTPRK-204ENST00000368210 ATP1A2P50993 1020 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 TBC1D10BQ4KMP7 808 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-204ENST00000368210 NAA35Q5VZE5 725 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 RTKN2Q8IZC4 609 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 NEDD1Q8NHV4 660 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 DCPSQ96C86 337 aaKnown RBP14.39□□□□□ -0.11
PTPRK-204ENST00000368210 AFF2P51816 1311 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 RGS16O15492 202 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-204ENST00000368210 PRR29P0C7W0 189 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 KRT15P19012 456 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 ARL1P40616 181 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-204ENST00000368210 CCDC144BQ3MJ40 725 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 CCDC89Q8N998 374 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 ANKRD7Q92527 254 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 CEP170P1Q96L14 293 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 GCNT4Q9P109 453 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 THEGQ9P2T0 379 aa14.39□□□□□ -0.11
PTPRK-204ENST00000368210 CEP170BQ9Y4F5 1589 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-204ENST00000368210 ASNSP08243 561 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 BPIFB4P59827 614 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 GPSM2P81274 684 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 C12orf60Q5U649 245 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 TDRD3Q9H7E2 651 aaKnown RBP14.38□□□□□ -0.11
PTPRK-204ENST00000368210 FAM196BA6NMK8 535 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 USP17L15C9J2P7 530 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 USP17L13C9JLJ4 530 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 USP17L11C9JVI0 530 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 USP17L18D6R9N7 530 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 USP17L22D6RA61 530 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 USP17L17D6RBQ6 530 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 USP17L19D6RCP7 530 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 USP17L20D6RJB6 530 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 ANKRD65E5RJM6 399 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 C21orf2O43822 256 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 OPHN1O60890 802 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 LRRN2O75325 713 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 STK10O94804 968 aaKnown RBP14.38□□□□□ -0.11
PTPRK-204ENST00000368210 PRCPP42785 496 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 VPS41P49754 854 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 USP17L24Q0WX57 530 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 DPY19L2Q6NUT2 758 aa14.38□□□□□ -0.11
PTPRK-204ENST00000368210 USP17L6PQ6QN14 398 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms