RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 ZBTB41Q5SVQ8 909 aa13.36□□□□□ -0.27
TPR-201ENST00000367478 PRXQ9BXM0 1461 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 SNX2O60749 519 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 TADA2BQ86TJ2 420 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 TRIM8Q9BZR9 551 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 INTUQ9ULD6 942 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 KDM5BQ9UGL1 1544 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 H0YIN7 160 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 NR2F2P24468 414 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 S100A5P33763 92 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 AP1B1Q10567 949 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 ODR4Q5SWX8 454 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 PLEKHM3Q6ZWE6 761 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 RHOT2Q8IXI1 618 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 SLC35F6Q8N357 371 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 GON4LQ3T8J9 2241 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 PSMD2Q13200 908 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 GPBP1L1Q9HC44 474 aaPredicted RBP13.35□□□□□ -0.27
TPR-201ENST00000367478 DDX28Q9NUL7 540 aaKnown RBP13.35□□□□□ -0.27
TPR-201ENST00000367478 KRT1P04264 644 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
TPR-201ENST00000367478 C1orf146Q5VVC0 180 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 TTC13Q8NBP0 860 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 LRRC4Q9HBW1 653 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 RNF103-CHMP3A0A140T963 221 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 NBPF20Q3BBV1 942 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 ZNF229Q9UJW7 825 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 GOLGA8IPA6NC78 632 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 GRAMD1AQ96CP6 724 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 NPATQ14207 1427 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 CDH2P19022 906 aaPredicted RBP13.35□□□□□ -0.27
TPR-201ENST00000367478 SERPINB4P48594 390 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 ACSBG1Q96GR2 724 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 PANX2Q96RD6 677 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 TIMM10P62072 90 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 RNF139Q8WU17 664 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 ACCSQ96QU6 501 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 SEPT3Q9UH03 358 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 BLOC1S6Q9UL45 172 aa13.35□□□□□ -0.27
TPR-201ENST00000367478 COPEO14579 308 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 ZBED1O96006 694 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 EPHB1P54762 984 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 PPARAQ07869 468 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 EFTUD2Q15029 972 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■□□□ 11.4
TPR-201ENST00000367478 IMPG1Q17R60 797 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 UHMK1Q8TAS1 419 aaKnown RBP13.34□□□□□ -0.27
TPR-201ENST00000367478 SLC7A3Q8WY07 619 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 GCNT4Q9P109 453 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 FAM135BQ49AJ0 1406 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 KRT75O95678 551 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 ATP5JP18859 108 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 MECOMQ03112 1051 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 NUGGCQ68CJ6 796 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 CYP26B1Q9NR63 512 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 ZBTB7BO15156 539 aaPredicted RBP13.34□□□□□ -0.27
TPR-201ENST00000367478 DEFA1P59665 94 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 DEFA3P59666 94 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 TMPRSS15P98073 1019 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 TBK1Q9UHD2 729 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 GOLGA8RI6L899 631 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 GPATCH4Q5T3I0 446 aaKnown RBP13.34□□□□□ -0.27
TPR-201ENST00000367478 ICE2Q659A1 982 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 CYTH2Q99418 400 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 hCG_1984214I3L0E3 225 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 SLFNL1Q499Z3 407 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 NAA35Q5VZE5 725 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 LARP4BQ92615 738 aaKnown RBP13.34□□□□□ -0.27
TPR-201ENST00000367478 ZRANB2O95218 330 aaKnown RBP eCLIP13.34□□□□□ -0.27
TPR-201ENST00000367478 ANP32DO95626 131 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 COPS2P61201 443 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 DYDC2Q96IM9 177 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 CALN1Q9BXU9 219 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 PLEKHG3A1L390 1219 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 HSPA1AP0DMV8 641 aaKnown RBP13.34□□□□□ -0.27
TPR-201ENST00000367478 HSPA1BP0DMV9 641 aaKnown RBP13.34□□□□□ -0.27
TPR-201ENST00000367478 IL10P22301 178 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 MRPS26Q9BYN8 205 aaKnown RBP13.34□□□□□ -0.27
TPR-201ENST00000367478 TMEM63CQ9P1W3 806 aa13.34□□□□□ -0.27
TPR-201ENST00000367478 PFKFB2O60825 505 aa13.33□□□□□ -0.27
TPR-201ENST00000367478 CPA1P15085 419 aa13.33□□□□□ -0.27
TPR-201ENST00000367478 PTGDRQ13258 359 aa13.33□□□□□ -0.27
TPR-201ENST00000367478 IDI1Q13907 227 aa13.33□□□□□ -0.27
TPR-201ENST00000367478 KLHL38Q2WGJ6 581 aa13.33□□□□□ -0.27
TPR-201ENST00000367478 EPM2AIP1Q7L775 607 aaPredicted RBP13.33□□□□□ -0.27
TPR-201ENST00000367478 GDAP1Q8TB36 358 aa13.33□□□□□ -0.27
TPR-201ENST00000367478 FOXP2O15409 715 aa13.33□□□□□ -0.27
TPR-201ENST00000367478 TOM1O60784 492 aa13.33□□□□□ -0.28
TPR-201ENST00000367478 ACBD5Q5T8D3 534 aaPredicted RBP13.33□□□□□ -0.28
TPR-201ENST00000367478 RUBCNQ92622 972 aa13.33□□□□□ -0.28
TPR-201ENST00000367478 FAM227BQ96M60 508 aa13.33□□□□□ -0.28
TPR-201ENST00000367478 WDR11Q9BZH6 1224 aa13.33□□□□□ -0.28
TPR-201ENST00000367478 PPARGC1AQ9UBK2 798 aaKnown RBP13.33□□□□□ -0.28
TPR-201ENST00000367478 THOC2Q8NI27 1593 aaKnown RBP13.33□□□□□ -0.28
TPR-201ENST00000367478 PMS1P54277 932 aaKnown RBP13.33□□□□□ -0.28
TPR-201ENST00000367478 ZYXQ15942 572 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms