RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 FAM26FQ5R3K3 315 aa16.67■□□□□ 0.26
NEK2-201ENST00000366998 APTXQ7Z2E3 356 aaKnown RBP16.67■□□□□ 0.26
NEK2-201ENST00000366998 MIER3Q7Z3K6 550 aa16.67■□□□□ 0.26
NEK2-201ENST00000366998 CSGALNACT2Q8N6G5 542 aa16.67■□□□□ 0.26
NEK2-201ENST00000366998 OPTNQ96CV9 577 aa16.67■□□□□ 0.26
NEK2-201ENST00000366998 HSD17B14Q9BPX1 270 aa16.67■□□□□ 0.26
NEK2-201ENST00000366998 SRRTQ9BXP5 876 aaKnown RBP16.67■□□□□ 0.26
NEK2-201ENST00000366998 BHMT2Q9H2M3 363 aa16.67■□□□□ 0.26
NEK2-201ENST00000366998 A1CFQ9NQ94 594 aaKnown RBP16.67■□□□□ 0.26
NEK2-201ENST00000366998 ADD3Q9UEY8 706 aaKnown RBP16.67■□□□□ 0.26
NEK2-201ENST00000366998 LIMA1Q9UHB6 759 aaKnown RBP16.67■□□□□ 0.26
NEK2-201ENST00000366998 KIAA1217Q5T5P2 1943 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 SLITRK3O94933 977 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 SFPQP23246 707 aaKnown RBP eCLIP16.66■□□□□ 0.26
NEK2-201ENST00000366998 HOXA7P31268 230 aaPredicted RBP16.66■□□□□ 0.26
NEK2-201ENST00000366998 EHHADHQ08426 723 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 ARSHQ5FYA8 562 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 ANKRD40Q6AI12 368 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 GUF1Q8N442 669 aaKnown RBP16.66■□□□□ 0.26
NEK2-201ENST00000366998 KIAA1524Q8TCG1 905 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 PIGOQ8TEQ8 1089 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 NOC3LQ8WTT2 800 aaKnown RBP16.66■□□□□ 0.26
NEK2-201ENST00000366998 THAP9Q9H5L6 903 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 ZNF408Q9H9D4 720 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 TAB2Q9NYJ8 693 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 CYP39A1Q9NYL5 469 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 TBC1D7Q9P0N9 293 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 MAGEC2Q9UBF1 373 aaPredicted RBP16.66■□□□□ 0.26
NEK2-201ENST00000366998 LCTP09848 1927 aa16.66■□□□□ 0.26
NEK2-201ENST00000366998 TEX33O43247 280 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 COPB1P53618 953 aaKnown RBP16.65■□□□□ 0.26
NEK2-201ENST00000366998 ITGB3BPQ13352 177 aaPredicted RBP16.65■□□□□ 0.26
NEK2-201ENST00000366998 LRRC41Q15345 812 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 HERC4Q5GLZ8 1057 aaPredicted RBP16.65■□□□□ 0.26
NEK2-201ENST00000366998 SPECC1LQ69YQ0 1117 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 ARMCX5Q6P1M9 558 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 XRRA1Q6P2D8 792 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 LBX2Q6XYB7 198 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 KCTD17Q8N5Z5 321 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 MB21D1Q8N884 522 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 NSUN6Q8TEA1 469 aaKnown RBP16.65■□□□□ 0.26
NEK2-201ENST00000366998 DUSP9Q99956 384 aaKnown RBP16.65■□□□□ 0.26
NEK2-201ENST00000366998 VPS16Q9H269 839 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 N4BP3O15049 544 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 PEX10O60683 326 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 NR3C2P08235 984 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 POTEJP0CG39 1038 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 B3GNT9Q6UX72 402 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 MYOCDQ8IZQ8 938 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 BANK1Q8NDB2 785 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 GLIS3Q8NEA6 775 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 CHST13Q8NET6 341 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 LXNQ9BS40 222 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 PAGR1Q9BTK6 254 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 BTBD7Q9P203 1132 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 KCNH4Q9UQ05 1017 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
NEK2-201ENST00000366998 DHX15O43143 795 aaKnown RBP16.64■□□□□ 0.25
NEK2-201ENST00000366998 SKILP12757 684 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 MUTP22033 750 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 CCZ1BP86790 482 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 CCZ1P86791 482 aaPredicted RBP16.64■□□□□ 0.25
NEK2-201ENST00000366998 GIT2Q14161 759 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 NOLC1Q14978 699 aaKnown RBP eCLIP16.64■□□□□ 0.25
NEK2-201ENST00000366998 MAP1SQ66K74 1059 aaPredicted RBP16.64■□□□□ 0.25
NEK2-201ENST00000366998 CENPPQ6IPU0 288 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 IRF2BP1Q8IU81 584 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 NEK9Q8TD19 979 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 REEP2Q9BRK0 252 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 RUSC1Q9BVN2 902 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 ASCC2Q9H1I8 757 aaPredicted RBP16.64■□□□□ 0.25
NEK2-201ENST00000366998 TBC1D22BQ9NU19 505 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 TCEAL9Q9UHQ7 104 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
NEK2-201ENST00000366998 TRAF5O00463 557 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 NRDCO43847 1150 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 EEF1GP26641 437 aaKnown RBP16.63■□□□□ 0.25
NEK2-201ENST00000366998 NLRX1Q86UT6 975 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 VSIG10LQ86VR7 867 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 FAM114A1Q8IWE2 563 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 ANKRD35Q8N283 1001 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 EEF2KMTQ96G04 330 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 NACC1Q96RE7 527 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 TSG101Q99816 390 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 FRMD3A2A2Y4 597 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 PES1O00541 588 aaKnown RBP16.63■□□□□ 0.25
NEK2-201ENST00000366998 TBCAO75347 108 aaKnown RBP16.63■□□□□ 0.25
NEK2-201ENST00000366998 HERVK_113P62684 666 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 RIOX2Q8IUF8 465 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 WRAP73Q9P2S5 460 aaPredicted RBP16.63■□□□□ 0.25
NEK2-201ENST00000366998 FBXO40Q9UH90 709 aa16.63■□□□□ 0.25
NEK2-201ENST00000366998 MYH11P35749 1972 aa16.62■□□□□ 0.25
NEK2-201ENST00000366998 LRRC10BA6NIK2 292 aa16.62■□□□□ 0.25
NEK2-201ENST00000366998 ZBTB39O15060 712 aa16.62■□□□□ 0.25
NEK2-201ENST00000366998 GOLGA8FQ08AF8 430 aa16.62■□□□□ 0.25
NEK2-201ENST00000366998 GOLGA8DPQ0D2H9 430 aa16.62■□□□□ 0.25
NEK2-201ENST00000366998 RINT1Q6NUQ1 792 aa16.62■□□□□ 0.25
NEK2-201ENST00000366998 FASTKD5Q7L8L6 764 aaKnown RBP16.62■□□□□ 0.25
NEK2-201ENST00000366998 NCAPG2Q86XI2 1143 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 1748.2 ms