RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 COBLL1Q53SF7 1204 aa12.13□□□□□ -0.47
H3F3A-202ENST00000366814 TCP11X2Q5H9J9 407 aa12.13□□□□□ -0.47
H3F3A-202ENST00000366814 UNC13DQ70J99 1090 aa12.13□□□□□ -0.47
H3F3A-202ENST00000366814 HAS1Q92839 578 aa12.13□□□□□ -0.47
H3F3A-202ENST00000366814 KIFC2Q96AC6 838 aa12.13□□□□□ -0.47
H3F3A-202ENST00000366814 FAM20AQ96MK3 541 aa12.13□□□□□ -0.47
H3F3A-202ENST00000366814 PNMA5Q96PV4 448 aa12.13□□□□□ -0.47
H3F3A-202ENST00000366814 PARK7Q99497 189 aaKnown RBP12.13□□□□□ -0.47
H3F3A-202ENST00000366814 KCNMB3Q9NPA1 279 aa12.13□□□□□ -0.47
H3F3A-202ENST00000366814 MAPK8IP1Q9UQF2 711 aa12.13□□□□□ -0.47
H3F3A-202ENST00000366814 PAXBP1Q9Y5B6 917 aa12.13□□□□□ -0.47
H3F3A-202ENST00000366814 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.13□□□□□ -0.47
H3F3A-202ENST00000366814 ITIH6Q6UXX5 1313 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 AKR1B15C9JRZ8 316 aaPredicted RBP12.12□□□□□ -0.47
H3F3A-202ENST00000366814 ZSCAN12O43309 604 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 STX10O60499 249 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 CCNE1P24864 410 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 HMGCS2P54868 508 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 MCM6Q14566 821 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 KRT31Q15323 416 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 C17orf99Q6UX52 265 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 CREBRFQ8IUR6 639 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 MYRIPQ8NFW9 859 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 RANBP17Q9H2T7 1088 aaKnown RBP12.12□□□□□ -0.47
H3F3A-202ENST00000366814 BLOC1S4Q9NUP1 217 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 ABCB11O95342 1321 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 LRRC10BA6NIK2 292 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 GCOM1H8Y6P7 765 aaPredicted RBP12.12□□□□□ -0.47
H3F3A-202ENST00000366814 FGFR1OPO95684 399 aaKnown RBP12.12□□□□□ -0.47
H3F3A-202ENST00000366814 POLR2MP0CAP2 368 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 COPB1P53618 953 aaKnown RBP12.12□□□□□ -0.47
H3F3A-202ENST00000366814 ZYXQ15942 572 aaKnown RBP12.12□□□□□ -0.47
H3F3A-202ENST00000366814 PRR16Q569H4 304 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 HYIQ5T013 277 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 CEP135Q66GS9 1140 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 APTXQ7Z2E3 356 aaKnown RBP12.12□□□□□ -0.47
H3F3A-202ENST00000366814 CNGA4Q8IV77 575 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 PROCA1Q8NCQ7 364 aaPredicted RBP12.12□□□□□ -0.47
H3F3A-202ENST00000366814 LRRC15Q8TF66 581 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 CRYGNQ8WXF5 182 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 LPAR1Q92633 364 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 P2RX5Q93086 422 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 BAG1Q99933 345 aaPredicted RBP12.12□□□□□ -0.47
H3F3A-202ENST00000366814 WDR18Q9BV38 432 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 TMOD4Q9NZQ9 345 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 AGTPBP1Q9UPW5 1226 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 PTPN22Q9Y2R2 807 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 SLC45A1Q9Y2W3 748 aa12.12□□□□□ -0.47
H3F3A-202ENST00000366814 GOLGA6L9A6NEM1 432 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 WDR46O15213 610 aaKnown RBP12.11□□□□□ -0.47
H3F3A-202ENST00000366814 CYP3A4P08684 503 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 CIITAP33076 1130 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 BACE1P56817 501 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 LACTBP83111 547 aaPredicted RBP12.11□□□□□ -0.47
H3F3A-202ENST00000366814 PABPC4Q13310 644 aaKnown RBP eCLIP12.11□□□□□ -0.47
H3F3A-202ENST00000366814 MTMR2Q13614 643 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 TREML2Q5T2D2 321 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 CSGALNACT2Q8N6G5 542 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 KCNV2Q8TDN2 545 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 SMCR8Q8TEV9 937 aaPredicted RBP12.11□□□□□ -0.47
H3F3A-202ENST00000366814 CCDC51Q96ER9 411 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 NAA15Q9BXJ9 866 aaKnown RBP12.11□□□□□ -0.47
H3F3A-202ENST00000366814 TMX1Q9H3N1 280 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 TRMT1Q9NXH9 659 aaKnown RBP12.11□□□□□ -0.47
H3F3A-202ENST00000366814 RABGAP1Q9Y3P9 1069 aa12.11□□□□□ -0.47
H3F3A-202ENST00000366814 C19orf81C9J6K1 198 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 DYNC1I1O14576 645 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 KIF20AO95235 890 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 CFBP00751 764 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 IDEP14735 1019 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 OSBPP22059 807 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 DYMQ7RTS9 669 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 KCTD17Q8N5Z5 321 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 PANX2Q96RD6 677 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 SRRTQ9BXP5 876 aaKnown RBP12.1□□□□□ -0.47
H3F3A-202ENST00000366814 ARHGAP39Q9C0H5 1083 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 VPS16Q9H269 839 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 PNMA3Q9UL41 463 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 PNMA2Q9UL42 364 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 TRIM49BA6NDI0 452 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 MYMKA6NI61 221 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 TEX33O43247 280 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 HOXA13P31271 388 aaPredicted RBP12.1□□□□□ -0.47
H3F3A-202ENST00000366814 CAP1Q01518 475 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 STK4Q13043 487 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 SH3D19Q5HYK7 790 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 KIAA1755Q5JYT7 1200 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 TTI2Q6NXR4 508 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 CCDC65Q8IXS2 484 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 TC2NQ8N9U0 490 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 ETNPPLQ8TBG4 499 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 DDX12PQ92771 950 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 TSG101Q99816 390 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 TAB2Q9NYJ8 693 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 KIAA1024Q9UPX6 916 aa12.1□□□□□ -0.47
H3F3A-202ENST00000366814 CTDP1Q9Y5B0 961 aaPredicted RBP12.1□□□□□ -0.47
H3F3A-202ENST00000366814 USP27XA6NNY8 438 aa12.09□□□□□ -0.47
H3F3A-202ENST00000366814 PES1O00541 588 aaKnown RBP12.09□□□□□ -0.47
H3F3A-202ENST00000366814 COBLO75128 1261 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms