RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 NLRX1Q86UT6 975 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 RASSF3Q86WH2 238 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 ZNF610Q8N9Z0 462 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 NETO2Q8NC67 525 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 PHOSPHO1Q8TCT1 267 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 RELTQ969Z4 430 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 AHCYL2Q96HN2 611 aaKnown RBP5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 C8orf48Q96LL4 319 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 ELF4Q99607 663 aaPredicted RBP5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 SMAD5Q99717 465 aaKnown RBP5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 SMOC1Q9H4F8 434 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 ACSS2Q9NR19 701 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 C19orf73Q9NVV2 129 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 ATP23Q9Y6H3 246 aa5.04□□□□□ -1.6
RNU6-28P-201ENST00000362378 ARID1BQ8NFD5 2236 aaPredicted RBP5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 SHTN1A0MZ66 631 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 KCNK3O14649 394 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 HGSO14964 777 aaPredicted RBP5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 HIP1RO75146 1068 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 CYP17A1P05093 508 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 SLC9A1P19634 815 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 TACR1P25103 407 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 KIF11P52732 1056 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 CYP4F8P98187 520 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 KLF1Q13351 362 aaPredicted RBP5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 PIN1Q13526 163 aaPredicted RBP5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 LRRC32Q14392 662 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 SNX17Q15036 470 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 PPP2R5AQ15172 486 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 SEC23AQ15436 765 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 KCTD1Q719H9 257 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 ZBTB46Q86UZ6 589 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 CABP7Q86V35 215 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 LILRA2Q8N149 483 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 FLCNQ8NFG4 579 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 SEC14L1Q92503 715 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 TSR2Q969E8 191 aaKnown RBP5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 SHISA4Q96DD7 197 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 HOOK2Q96ED9 719 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 SLC13A1Q9BZW2 595 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 CD244Q9BZW8 370 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 CDH19Q9H159 772 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 PRDM7Q9NQW5 492 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 KCNH7Q9NS40 1196 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 ZNF652Q9Y2D9 606 aa5.03□□□□□ -1.6
RNU6-28P-201ENST00000362378 FZD9O00144 591 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 SCDO00767 359 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 SRGAP3O43295 1099 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 PSPNO60542 156 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 ABLIM3O94929 683 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 PNLIPP16233 465 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 ITGB7P26010 798 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 SDHAP31040 664 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 GJA4P35212 333 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 KRT85P78386 507 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 TIGD5Q53EQ6 642 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 BICRALQ6AI39 1079 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 EP400NLQ6ZTU2 488 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 DCP2Q8IU60 420 aaKnown RBP5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 TRIM48Q8IWZ4 208 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 ZZZ3Q8IYH5 903 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 FUBP3Q96I24 572 aaKnown RBP eCLIP5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 PCIF1Q9H4Z3 704 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 ZMAT4Q9H898 229 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 AASDHPPTQ9NRN7 309 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 TOMM22Q9NS69 142 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 ZIM2Q9NZV7 527 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 ASH2LQ9UBL3 628 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 TELO2Q9Y4R8 837 aa5.02□□□□□ -1.61
RNU6-28P-201ENST00000362378 A0A1W2PQJ5 194 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 TRIM75PA6NK02 468 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 FAM90A27PA6NNH2 459 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 SLC27A2O14975 620 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 SGSM2O43147 1006 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 RFPL1O75677 317 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 SCGB1D2O95969 90 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 C4BPAP04003 597 aaKnown RBP5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 PTPN1P18031 435 aaKnown RBP5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 SSTR4P31391 388 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 FNTBP49356 437 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 ERVFC1P60507 584 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 TUSC3Q13454 348 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 LRRC41Q15345 812 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 ABCB5Q2M3G0 1257 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 CPZQ66K79 652 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 CHPFQ8IZ52 775 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 C1orf162Q8NEQ5 155 aaPredicted RBP5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 TTLL11Q8NHH1 800 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 C16orf92Q96LL3 132 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 RTFDC1Q9BY42 306 aaPredicted RBP5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 ZDHHC5Q9C0B5 715 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 AP5M1Q9H0R1 490 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 TCF7L1Q9HCS4 588 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 TNFRSF12AQ9NP84 129 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 MBNL3Q9NUK0 354 aaKnown RBP5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 C14orf119Q9NWQ9 140 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 MYOTQ9UBF9 498 aa5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 ANGEL1Q9UNK9 670 aaKnown RBP5.01□□□□□ -1.61
RNU6-28P-201ENST00000362378 WASHC2AQ641Q2 1341 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms