RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 DNAJC19Q96DA6 116 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
SMC3-201ENST00000361804 RNPC3Q96LT9 517 aaKnown RBP11.67□□□□□ -0.54
SMC3-201ENST00000361804 KIAA1024Q9UPX6 916 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 BCS1LQ9Y276 419 aa11.67□□□□□ -0.54
SMC3-201ENST00000361804 SERPINB2P05120 415 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 HNRNPH3P31942 346 aaKnown RBP11.66□□□□□ -0.54
SMC3-201ENST00000361804 NNTQ13423 1086 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 KIAA0753Q2KHM9 967 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 GJB7Q6PEY0 223 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 COL23A1Q86Y22 540 aaPredicted RBP11.66□□□□□ -0.54
SMC3-201ENST00000361804 NOX5Q96PH1 765 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 WDR81Q562E7 1941 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 SHOX2O60902 331 aaPredicted RBP11.66□□□□□ -0.54
SMC3-201ENST00000361804 UFL1O94874 794 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 SLC9A1P19634 815 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 MCM3P25205 808 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 HPDP32754 393 aaPredicted RBP11.66□□□□□ -0.54
SMC3-201ENST00000361804 PAFAH1B1P43034 410 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 FIGNQ5HY92 759 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 CCDC70Q6NSX1 233 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 C16orf86Q6ZW13 317 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 RUFY1Q96T51 708 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 CUEDC2Q9H467 287 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 PANK4Q9NVE7 773 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 AJAP1Q9UKB5 411 aaPredicted RBP11.66□□□□□ -0.54
SMC3-201ENST00000361804 ADCY7P51828 1080 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 KRT79Q5XKE5 535 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 SPTY2D1Q68D10 685 aaPredicted RBP11.66□□□□□ -0.54
SMC3-201ENST00000361804 GUF1Q8N442 669 aaKnown RBP11.66□□□□□ -0.54
SMC3-201ENST00000361804 PIK3R5Q8WYR1 880 aa11.66□□□□□ -0.54
SMC3-201ENST00000361804 USP17L10C9JJH3 530 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
SMC3-201ENST00000361804 RIMBP2O15034 1052 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 EIF3HO15372 352 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMC3-201ENST00000361804 RAD51CO43502 376 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 TRIM37O94972 964 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 PSMC6P62333 389 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 CDK17Q00537 523 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 MFSD14BQ5SR56 506 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 SH3BP5LQ7L8J4 393 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 MYOCDQ8IZQ8 938 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 NEDD1Q8NHV4 660 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 PDGFDQ9GZP0 370 aaPredicted RBP11.65□□□□□ -0.54
SMC3-201ENST00000361804 POTEFA5A3E0 1075 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 TCP1P17987 556 aaKnown RBP11.65□□□□□ -0.54
SMC3-201ENST00000361804 EPHB4P54760 987 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 PPFIA1Q13136 1202 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 HERC4Q5GLZ8 1057 aaPredicted RBP11.65□□□□□ -0.54
SMC3-201ENST00000361804 SFMBT2Q5VUG0 894 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 POTEEQ6S8J3 1075 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 CNBD1Q8NA66 436 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 WDR66Q8TBY9 1149 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 COL4A3BPQ9Y5P4 624 aa11.65□□□□□ -0.54
SMC3-201ENST00000361804 HSF2BPO75031 334 aa11.65□□□□□ -0.55
SMC3-201ENST00000361804 FAM26FQ5R3K3 315 aa11.65□□□□□ -0.55
SMC3-201ENST00000361804 IQCEQ6IPM2 695 aa11.65□□□□□ -0.55
SMC3-201ENST00000361804 GALNT17Q6IS24 598 aa11.65□□□□□ -0.55
SMC3-201ENST00000361804 SH3GL2Q99962 352 aa11.65□□□□□ -0.55
SMC3-201ENST00000361804 DDX25Q9UHL0 483 aaKnown RBP11.65□□□□□ -0.55
SMC3-201ENST00000361804 LEMD3Q9Y2U8 911 aa11.65□□□□□ -0.55
SMC3-201ENST00000361804 GRID2IPA4D2P6 1211 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 KCNK3O14649 394 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 LCA5LO95447 670 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 SNHG28P0DPA3 235 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 FLT3P36888 993 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 KCNA1Q09470 495 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 RRP1BQ14684 758 aaKnown RBP11.64□□□□□ -0.55
SMC3-201ENST00000361804 ADAT2Q7Z6V5 191 aaKnown RBP11.64□□□□□ -0.55
SMC3-201ENST00000361804 TADA2BQ86TJ2 420 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 ADGRF4Q8IZF3 695 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 DAGLAQ9Y4D2 1042 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 MPHOSPH10O00566 681 aaKnown RBP11.64□□□□□ -0.55
SMC3-201ENST00000361804 COPB2P35606 906 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 TMEM266Q2M3C6 531 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 NEUROG2Q9H2A3 272 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 JMJD4Q9H9V9 463 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 SFI1A8K8P3 1242 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 NDUFAB1O14561 156 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 IBSPP21815 317 aaPredicted RBP11.64□□□□□ -0.55
SMC3-201ENST00000361804 POLD1P28340 1107 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 RFC4P35249 363 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 SCNN1DP51172 638 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 CACNB3P54284 484 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 PTK2Q05397 1052 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 KLHL30Q0D2K2 578 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 HLTFQ14527 1009 aaKnown RBP eCLIP11.64□□□□□ -0.554e-10■■□□□ 11.8
SMC3-201ENST00000361804 SLC9C1Q4G0N8 1177 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 ZCWPW2Q504Y3 356 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 NAA35Q5VZE5 725 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 MAATS1Q7Z4T9 603 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 CCDC84Q86UT8 332 aaPredicted RBP11.64□□□□□ -0.55
SMC3-201ENST00000361804 SCFD1Q8WVM8 642 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 RLFQ13129 1914 aa11.64□□□□□ -0.55
SMC3-201ENST00000361804 HTTP42858 3142 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 MYO1FO00160 1098 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 EBAG9O00559 213 aa11.63□□□□□ -0.55
SMC3-201ENST00000361804 ITGA4P13612 1032 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms