RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 PARK7Q99497 189 aaKnown RBP15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 SAMSN1Q9NSI8 373 aaKnown RBP15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 COL20A1Q9P218 1284 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 GCOM1H8Y6P7 765 aaPredicted RBP15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 NRDCO43847 1150 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 POLR2MP0CAP2 368 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 PSEN1P49768 467 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 UBXN2AP68543 259 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 PAK1Q13153 545 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 HSP90AA4PQ58FG1 418 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 KRT79Q5XKE5 535 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 SMYD4Q8IYR2 804 aaPredicted RBP15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 CRYGNQ8WXF5 182 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 CTAGE1Q96RT6 745 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 PLIN2Q99541 437 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 RABGAP1Q9Y3P9 1069 aa15.44■□□□□ 0.06
CSNK1E-201ENST00000359867 MYH7BA7E2Y1 1941 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 PIK3CDO00329 1044 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 ERCC3P19447 782 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 PPP1R2P41236 205 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 RPS6P62753 249 aaKnown RBP15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 ERVK-9P63128 1117 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 ERVK-24P63145 666 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 GRB10Q13322 594 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 TAF1CQ15572 869 aaPredicted RBP15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 WDR78Q5VTH9 848 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 RIOX2Q8IUF8 465 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 KRT222Q8N1A0 295 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 LRRC15Q8TF66 581 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 HAS1Q92839 578 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 TRIM9Q9C026 710 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 LRRC27Q9C0I9 530 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 ZNF446Q9NWS9 450 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 CTNND2Q9UQB3 1225 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 SPDYE3A6NKU9 549 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 MARCH6O60337 910 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 SV2BQ7L1I2 683 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 CDK5RAP3Q96JB5 506 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 PORCNQ9H237 461 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 ACAD9Q9H845 621 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 KCND1Q9NSA2 647 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 CALCOCO1Q9P1Z2 691 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 CPA4Q9UI42 421 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 PCDHA12Q9UN75 941 aa15.43■□□□□ 0.06
CSNK1E-201ENST00000359867 RBBP6Q7Z6E9 1792 aaKnown RBP15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 A0A1B0GTH6 734 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 STX17P56962 302 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 SREBF2Q12772 1141 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 STIM1Q13586 685 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 BAATQ14032 418 aaPredicted RBP15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 NR1I3Q14994 352 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 SLFN12Q8IYM2 578 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 ADSSL1Q8N142 457 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 GIMAP8Q8ND71 665 aaPredicted RBP15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 KCNMB3Q9NPA1 279 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 A1CFQ9NQ94 594 aaKnown RBP15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 INTS13Q9NVM9 706 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 TBX3O15119 743 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 SREBF1P36956 1147 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 PRCPP42785 496 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 KCNJ6P48051 423 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 HSD17B4P51659 736 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 ARHGAP4P98171 946 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 SPAG1Q07617 926 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 NOGQ13253 232 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 RNF207Q6ZRF8 634 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 MCF2L2Q86YR7 1114 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 NELFBQ8WX92 580 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 PNMA5Q96PV4 448 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 EFCC1Q9HA90 598 aa15.42■□□□□ 0.06
CSNK1E-201ENST00000359867 INHBEP58166 350 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 Q4G0T1 1027 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 TMEM119Q4V9L6 283 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 HYIQ5T013 277 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 CNNM4Q6P4Q7 775 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 SYTL5Q8TDW5 730 aaPredicted RBP15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 SNX29Q8TEQ0 813 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 TMX1Q9H3N1 280 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 BLOC1S4Q9NUP1 217 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 PNMA2Q9UL42 364 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 CIITAP33076 1130 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 COBLL1Q53SF7 1204 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 GPRC5AQ8NFJ5 357 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 LARP4BQ92615 738 aaKnown RBP15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 DNAI1Q9UI46 699 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 GDAQ9Y2T3 454 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 KDM3AQ9Y4C1 1321 aa15.41■□□□□ 0.06
CSNK1E-201ENST00000359867 LOC102724159A0A0B4J2E5 919 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 PVALEFA0A1B0GWK0 134 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 POTEMA6NI47 508 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 LRRC10BA6NIK2 292 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 CYP3A4P08684 503 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 TBX2Q13207 712 aaPredicted RBP15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 PWP2Q15269 919 aaKnown RBP15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 FILIP1LQ4L180 1135 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 APTXQ7Z2E3 356 aaKnown RBP15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 DHTKD1Q96HY7 919 aaPredicted RBP15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 TAAR1Q96RJ0 339 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 NT5C3AQ9H0P0 336 aa15.4■□□□□ 0.06
CSNK1E-201ENST00000359867 EXOC1Q9NV70 894 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 234.1 ms