RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 PPP1R9AQ9ULJ8 1098 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 MRPL11Q9Y3B7 192 aaKnown RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 TELO2Q9Y4R8 837 aa5.67□□□□□ -1.5
ATXN3-202ENST00000359366 CTDP1Q9Y5B0 961 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-202ENST00000359366 CYP3A7-CYP3A51PA0A087WV96 503 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 UQCRHLA0A096LP55 91 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 TMEM150BA6NC51 233 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 RSPH10B2B2RC85 870 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 RBAK-RBAKDNI3L0D1 243 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 VWA5AO00534 786 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 UQCRHP07919 91 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 PLA2G4BP0C869 781 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 RSPH10BP0C881 870 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 SPATA31C1P0DKV0 1188 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 GCFC2P16383 781 aaKnown RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 ITGB5P18084 799 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 CYP3A7P24462 503 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 ERCC5P28715 1186 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 RPS6P62753 249 aaKnown RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 CCZ1BP86790 482 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 CCZ1P86791 482 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 PDIA5Q14554 519 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 LRCH2Q5VUJ6 765 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 ANKRD40Q6AI12 368 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 APTXQ7Z2E3 356 aaKnown RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 GPBP1Q86WP2 473 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 IRF2BP1Q8IU81 584 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 TPH2Q8IWU9 490 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 NELFCDQ8IXH7 590 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 ADSSL1Q8N142 457 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 TRIM47Q96LD4 638 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 C16orf45Q96MC5 204 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 TRERF1Q96PN7 1200 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 RAB34Q9BZG1 259 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 ZNF408Q9H9D4 720 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 SLC38A10Q9HBR0 1119 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 WRAP73Q9P2S5 460 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 DACH1Q9UI36 760 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 VAV3Q9UKW4 847 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 R3HCC1Q9Y3T6 440 aaKnown RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 SNCAIPQ9Y6H5 919 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 PHIPQ8WWQ0 1821 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 DOCK5Q9H7D0 1870 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 PIK3CDO00329 1044 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 ZNF500O60304 480 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 RHOBTB3O94955 611 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 SP4Q02446 784 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 TMEM132BQ14DG7 1078 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 KRT31Q15323 416 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 Q4G0T1 1027 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 ARSHQ5FYA8 562 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 CDKAL1Q5VV42 579 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 SNRNP48Q6IEG0 339 aaKnown RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 MAEAQ7L5Y9 396 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 VSTM4Q8IW00 320 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 SULF1Q8IWU6 871 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 GIMAP8Q8ND71 665 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 LPAR1Q92633 364 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 DCPSQ96C86 337 aaKnown RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 DYDC2Q96IM9 177 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 MBOAT7Q96N66 472 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 DUSP9Q99956 384 aaKnown RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 C7orf25Q9BPX7 421 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 ZNF577Q9BSK1 485 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 SRRTQ9BXP5 876 aaKnown RBP5.66□□□□□ -1.5
ATXN3-202ENST00000359366 GLT8D2Q9H1C3 349 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 ZNF112Q9UJU3 913 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 BOLA1Q9Y3E2 137 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 RLFQ13129 1914 aa5.66□□□□□ -1.5
ATXN3-202ENST00000359366 KCNJ18B7U540 433 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 RNF225M0QZC1 329 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-202ENST00000359366 TRAF5O00463 557 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 GAS7O60861 476 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 FOSP01100 380 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-202ENST00000359366 KRT18P05783 430 aaKnown RBP5.65□□□□□ -1.5
ATXN3-202ENST00000359366 KLK7P49862 253 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 CASP5P51878 434 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 MRPS9P82933 396 aaKnown RBP5.65□□□□□ -1.5
ATXN3-202ENST00000359366 FSTL1Q12841 308 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 SEMA3FQ13275 785 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 BAATQ14032 418 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-202ENST00000359366 KCNJ12Q14500 433 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 SETDB1Q15047 1291 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 CEP55Q53EZ4 464 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 GADL1Q6ZQY3 521 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 KSR1Q8IVT5 923 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.65□□□□□ -1.5
ATXN3-202ENST00000359366 SYTL5Q8TDW5 730 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-202ENST00000359366 ZNF526Q8TF50 670 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-202ENST00000359366 DNAJC19Q96DA6 116 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 EIF2AK1Q9BQI3 630 aaKnown RBP5.65□□□□□ -1.5
ATXN3-202ENST00000359366 PYM1Q9BRP8 204 aaKnown RBP5.65□□□□□ -1.5
ATXN3-202ENST00000359366 RUSC1Q9BVN2 902 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 BHMT2Q9H2M3 363 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 TMX1Q9H3N1 280 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 SEMA6BQ9H3T3 888 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 UNC45AQ9H3U1 944 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 ADARB2Q9NS39 739 aaKnown RBP5.65□□□□□ -1.5
ATXN3-202ENST00000359366 RNF146Q9NTX7 359 aa5.65□□□□□ -1.5
ATXN3-202ENST00000359366 RMND1Q9NWS8 449 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms