RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 KCTD16Q68DU8 428 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 FAM184BQ9ULE4 1060 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 COL24A1Q17RW2 1714 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 GOLGA6CA6NDK9 693 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 GDF11O95390 407 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 GOLGA6DP0CG33 693 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 SLC9A1P19634 815 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 HOXA13P31271 388 aaPredicted RBP22.53■■□□□ 1.2
COL13A1-202ENST00000357811 GUCY2FP51841 1108 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 KLHL30Q0D2K2 578 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 CCDC65Q8IXS2 484 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 GOLGA6AQ9NYA3 693 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 PPEF1O14829 653 aaPredicted RBP22.53■■□□□ 1.2
COL13A1-202ENST00000357811 EEF2P13639 858 aaKnown RBP22.53■■□□□ 1.2
COL13A1-202ENST00000357811 CYP11B2P19099 503 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 NR2F2P24468 414 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 NOVP48745 357 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 CLK2P49760 499 aaKnown RBP22.53■■□□□ 1.2
COL13A1-202ENST00000357811 NT5C2P49902 561 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 COBLL1Q53SF7 1204 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 CYP2W1Q8TAV3 490 aa22.53■■□□□ 1.2
COL13A1-202ENST00000357811 AENQ8WTP8 325 aaKnown RBP22.53■■□□□ 1.2
COL13A1-202ENST00000357811 IGKV6D-41A0A0C4DH26 115 aa22.52■■□□□ 1.2
COL13A1-202ENST00000357811 RSPH10B2B2RC85 870 aa22.52■■□□□ 1.2
COL13A1-202ENST00000357811 GLI1P08151 1106 aa22.52■■□□□ 1.2
COL13A1-202ENST00000357811 RSPH10BP0C881 870 aa22.52■■□□□ 1.2
COL13A1-202ENST00000357811 TCP1P17987 556 aaKnown RBP22.52■■□□□ 1.2
COL13A1-202ENST00000357811 AARSP49588 968 aaKnown RBP eCLIP22.52■■□□□ 1.2
COL13A1-202ENST00000357811 ARSHQ5FYA8 562 aa22.52■■□□□ 1.2
COL13A1-202ENST00000357811 VIPAS39Q9H9C1 493 aa22.52■■□□□ 1.2
COL13A1-202ENST00000357811 ANO3Q9BYT9 981 aa22.52■■□□□ 1.2
COL13A1-202ENST00000357811 DNAJC18Q9H819 358 aa22.52■■□□□ 1.2
COL13A1-202ENST00000357811 NFU1Q9UMS0 254 aa22.52■■□□□ 1.2
COL13A1-202ENST00000357811 MYH7BA7E2Y1 1941 aa22.52■■□□□ 1.19
COL13A1-202ENST00000357811 CARSP49589 748 aaKnown RBP22.51■■□□□ 1.19
COL13A1-202ENST00000357811 KCNA1Q09470 495 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 KCNH2Q12809 1159 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 CDC37Q16543 378 aaPredicted RBP22.51■■□□□ 1.19
COL13A1-202ENST00000357811 SPICE1Q8N0Z3 855 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 MMGT1Q8N4V1 131 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 CEP72Q9P209 647 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 STIM2Q9P246 746 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 FAM153BP0C7A2 387 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 GUCY2DQ02846 1103 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 PSMD2Q13200 908 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 FAM153CQ494X1 144 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 SRLQ86TD4 932 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 KLHL7Q8IXQ5 586 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 SH2D3CQ8N5H7 860 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 KRT12Q99456 494 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 FAM153AQ9UHL3 310 aa22.51■■□□□ 1.19
COL13A1-202ENST00000357811 CLIC2O15247 247 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 CATSPER3Q86XQ3 398 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 ARL8AQ96BM9 186 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 EPB41L5Q9HCM4 733 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 hCG_1984214I3L0E3 225 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 LCA5LO95447 670 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 KRT14P02533 472 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 SEPT2Q15019 361 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 GJB7Q6PEY0 223 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 ZNF713Q8N859 430 aaPredicted RBP22.5■■□□□ 1.19
COL13A1-202ENST00000357811 FAM76AQ8TAV0 307 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 CERKQ8TCT0 537 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 ATP6V0A2Q9Y487 856 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 DDTLA6NHG4 134 aaPredicted RBP22.5■■□□□ 1.19
COL13A1-202ENST00000357811 UBAP1LF5GYI3 381 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 SERPING1P05155 500 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 HLA-DOAP06340 250 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 MYBP10242 640 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 NOP2P46087 812 aaKnown RBP22.5■■□□□ 1.19
COL13A1-202ENST00000357811 SFR1Q86XK3 245 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 TRIM59Q8IWR1 403 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 MSL3Q8N5Y2 521 aaKnown RBP22.5■■□□□ 1.19
COL13A1-202ENST00000357811 LRRC27Q9C0I9 530 aa22.5■■□□□ 1.19
COL13A1-202ENST00000357811 ORC2Q13416 577 aaPredicted RBP22.49■■□□□ 1.19
COL13A1-202ENST00000357811 SLFN13Q68D06 897 aa22.49■■□□□ 1.19
COL13A1-202ENST00000357811 APOBEC3HQ6NTF7 200 aaKnown RBP22.49■■□□□ 1.19
COL13A1-202ENST00000357811 PCDHA2Q9Y5H9 948 aa22.49■■□□□ 1.19
COL13A1-202ENST00000357811 TOM1O60784 492 aa22.49■■□□□ 1.19
COL13A1-202ENST00000357811 GPATCH4Q5T3I0 446 aaKnown RBP22.49■■□□□ 1.19
COL13A1-202ENST00000357811 SPAG5Q96R06 1193 aa22.49■■□□□ 1.19
COL13A1-202ENST00000357811 NT5C3AQ9H0P0 336 aa22.49■■□□□ 1.19
COL13A1-202ENST00000357811 KCTD10Q9H3F6 313 aa22.49■■□□□ 1.19
COL13A1-202ENST00000357811 PROM2Q8N271 834 aa22.48■■□□□ 1.19
COL13A1-202ENST00000357811 RGL1Q9NZL6 768 aa22.48■■□□□ 1.19
COL13A1-202ENST00000357811 HEXIM1O94992 359 aaKnown RBP22.48■■□□□ 1.19
COL13A1-202ENST00000357811 CASP4P49662 377 aa22.48■■□□□ 1.19
COL13A1-202ENST00000357811 ATP1A2P50993 1020 aa22.48■■□□□ 1.19
COL13A1-202ENST00000357811 PTK2Q05397 1052 aa22.48■■□□□ 1.19
COL13A1-202ENST00000357811 CFAP221Q4G0U5 840 aa22.48■■□□□ 1.19
COL13A1-202ENST00000357811 PAXIP1Q6ZW49 1069 aaPredicted RBP22.48■■□□□ 1.19
COL13A1-202ENST00000357811 KSR1Q8IVT5 923 aa22.48■■□□□ 1.19
COL13A1-202ENST00000357811 REEP2Q9BRK0 252 aa22.48■■□□□ 1.19
COL13A1-202ENST00000357811 HDAC9Q9UKV0 1011 aa22.48■■□□□ 1.19
COL13A1-202ENST00000357811 CHMP2AO43633 222 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 UBXN2AP68543 259 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 ARHGAP4P98171 946 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 ASIC2Q16515 512 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 RUFY1Q96T51 708 aa22.47■■□□□ 1.19
COL13A1-202ENST00000357811 DHX36Q9H2U1 1008 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms