RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 FRMPD2Q68DX3 1309 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 NEFHP12036 1026 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 FLT1P17948 1338 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 TNNI2P48788 182 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 SFMBT2Q5VUG0 894 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 DDX42Q86XP3 938 aaKnown RBP eCLIP9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 SH3RF3Q8TEJ3 882 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 PIK3R5Q8WYR1 880 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 TAF4BQ92750 862 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 DDX12PQ92771 950 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 COA7Q96BR5 231 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 PIGSQ96S52 555 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 C7orf25Q9BPX7 421 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 AP1M1Q9BXS5 423 aa9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 TPX2Q9ULW0 747 aaKnown RBP9.03□□□□□ -0.96
CDC42SE1-201ENST00000357235 LOC102724428A0A0B4J2F2 783 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 A0A1W2PQJ5 194 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 TDP2O95551 362 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 SIK1P57059 783 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 DRP2Q13474 957 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 THEMIS2Q5TEJ8 643 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 ZNF662Q6ZS27 426 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 SLC51AQ86UW1 340 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 FAM228AQ86W67 206 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 DGKHQ86XP1 1220 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 ZSCAN29Q8IWY8 852 aaPredicted RBP9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 FUKQ8N0W3 1084 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 REXO1Q8N1G1 1221 aaKnown RBP9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 AK8Q96MA6 479 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 NUDT12Q9BQG2 462 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 MMTAG2Q9BU76 263 aaKnown RBP9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 SH3GLB2Q9NR46 395 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 CHCHD3Q9NX63 227 aaKnown RBP9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 ANKIB1Q9P2G1 1089 aa9.02□□□□□ -0.96
CDC42SE1-201ENST00000357235 MYH13Q9UKX3 1938 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 CEP104O60308 925 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 FGFR1OPO95684 399 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 FGRP09769 529 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 GNA11P29992 359 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 KLHL30Q0D2K2 578 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 MTA1Q13330 715 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 ITPK1Q13572 414 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 GRM4Q14833 912 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 TMEM266Q2M3C6 531 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 FAM83BQ5T0W9 1011 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 CENPPQ6IPU0 288 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 CCDC121Q6ZUS5 278 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 KRT25Q7Z3Z0 450 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 UBLCP1Q8WVY7 318 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 GPR101Q96P66 508 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 TRIM31Q9BZY9 425 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 CUEDC2Q9H467 287 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 ACTR5Q9H9F9 607 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 PLAAQ9Y263 795 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 ZNF652Q9Y2D9 606 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 DISP2A7MBM2 1401 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 BCL9O00512 1426 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 LAD1O00515 517 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 RAD51CO43502 376 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 KRT18P05783 430 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 SETSIPP0DME0 302 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 RPS8P62241 208 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 HDLBPQ00341 1268 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 IFFO1Q0D2I5 559 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 FIGNQ5HY92 759 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 NAA35Q5VZE5 725 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 KRT79Q5XKE5 535 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 PDXDC1Q6P996 788 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 CASKIN2Q8WXE0 1202 aa9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 SUDS3Q9H7L9 328 aaPredicted RBP9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 LUC7LQ9NQ29 371 aaKnown RBP9.02□□□□□ -0.97
CDC42SE1-201ENST00000357235 DUOX1Q9NRD9 1551 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 ROBO1Q9Y6N7 1651 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 A0A087X0T9 212 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 SLC37A4O43826 429 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 LDHBP07195 334 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 FAM228BP0C875 321 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 CDK17Q00537 523 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 GRB10Q13322 594 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 C12orf60Q5U649 245 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 KCNK18Q7Z418 384 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 BAP1Q92560 729 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 TIAM2Q8IVF5 1701 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 M0R2N6 131 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 PPFIA2O75334 1257 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 PPP1R37O75864 691 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 RTN3O95197 1032 aaPredicted RBP9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 PRLRP16471 622 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 TMOD1P28289 359 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 CTNNA1P35221 906 aaKnown RBP9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 SKOR1P84550 965 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 TCERG1LQ5VWI1 586 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 UNC13DQ70J99 1090 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 MYOCDQ8IZQ8 938 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 SPAG5Q96R06 1193 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 CCT8L2Q96SF2 557 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 EYA3Q99504 573 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 PAGR1Q9BTK6 254 aa9.01□□□□□ -0.97
CDC42SE1-201ENST00000357235 YIPF3Q9GZM5 350 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms