RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 TSPYL6Q8N831 410 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 P2RX5Q93086 422 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 MED7O43513 233 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 DEFA1P59665 94 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 DEFA3P59666 94 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 MYO1EQ12965 1108 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 ITIH4Q14624 930 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 PVALEFA0A1B0GWK0 134 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 SLC35F6Q8N357 371 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 RIN3Q8TB24 985 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 KDM4CQ9H3R0 1056 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 EPB41L5Q9HCM4 733 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 WDR46O15213 610 aaKnown RBP7.07□□□□□ -1.28
VPS13B-202ENST00000357162 CALB1P05937 261 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 PPWD1Q96BP3 646 aaKnown RBP7.07□□□□□ -1.28
VPS13B-202ENST00000357162 TRIM62Q9BVG3 475 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 CHEK2O96017 543 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 IFNA8P32881 189 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 RANBP1P43487 201 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 ARHGDIAP52565 204 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 SNRPFP62306 86 aaKnown RBP7.07□□□□□ -1.28
VPS13B-202ENST00000357162 IRX5P78411 483 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-202ENST00000357162 KIF23Q02241 960 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-202ENST00000357162 ART3Q13508 389 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 KMT5BQ4FZB7 885 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 WNT8AQ9H1J5 351 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.07□□□□□ -1.28
VPS13B-202ENST00000357162 DMRT2Q9Y5R5 561 aa7.07□□□□□ -1.28
VPS13B-202ENST00000357162 TJP3O95049 919 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 KLHL2O95198 593 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 SESN3P58005 492 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 LRMPQ12912 555 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 MMEL1Q495T6 779 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 NCAPH2Q6IBW4 605 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 MPRIPQ6WCQ1 1025 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ENOSF1Q7L5Y1 443 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 NLRP14Q86W24 1093 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 CHURC1Q8WUH1 139 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 CCDC127Q96BQ5 260 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 EVPLQ92817 2033 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ASAP2O43150 1006 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 SLC1A4P43007 532 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 C1orf146Q5VVC0 180 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ZFP69BQ9UJL9 534 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 APOBEC2Q9Y235 224 aaKnown RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 A0A1B0GTH6 734 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 SMARCA1P28370 1054 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 SLC1A1P43005 524 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ATP1A2P50993 1020 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 GUCY2FP51841 1108 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 MORF4L2Q15014 288 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 TRIM50Q86XT4 487 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 LARP4BQ92615 738 aaKnown RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 PRLRP16471 622 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ALX1Q15699 326 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 CNGA3Q16281 694 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ZMYM1Q5SVZ6 1142 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 PARVBQ9HBI1 364 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 TRPM1Q7Z4N2 1603 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ZNF407Q9C0G0 2248 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 NCOA3Q9Y6Q9 1424 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 GADD45BO75293 160 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 AFPP02771 609 aaKnown RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 SLFN12LQ6IEE8 588 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ACAD11Q709F0 780 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 SUGP1Q8IWZ8 645 aaKnown RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ZNF654Q8IZM8 581 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 SCG3Q8WXD2 468 aaKnown RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.06□□□□□ -1.282e-6■■□□□ 13.6
VPS13B-202ENST00000357162 CTNNAL1Q9UBT7 734 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 PLAAQ9Y263 795 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 FAM186BQ8IYM0 893 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 SYT2Q8N9I0 419 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ATP11CQ8NB49 1132 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ZNF483Q8TF39 744 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 TRIM63Q969Q1 353 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 SCN8AQ9UQD0 1980 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 LRRIQ3A6PVS8 624 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 SGO2Q562F6 1265 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 CCDC134Q9H6E4 229 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 KIAA1586Q9HCI6 787 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.06□□□□□ -1.282e-7■■■■■ 28
VPS13B-202ENST00000357162 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 IL2RBP14784 551 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 MIGA1Q8NAN2 632 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ACEP12821 1306 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ESRRAP11474 423 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 POLA2Q14181 598 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 TSHZ3Q63HK5 1081 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 LCA5Q86VQ0 697 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 LRRC2Q9BYS8 371 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 GPBP1L1Q9HC44 474 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 MT-ND3P03897 115 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 NDUFA8P51970 172 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 PDE1BQ01064 536 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 TNFAIP1Q13829 316 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 TAF1BQ53T94 588 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 APOA5Q6Q788 366 aa7.06□□□□□ -1.28
VPS13B-202ENST00000357162 ZFRQ96KR1 1074 aaKnown RBP7.06□□□□□ -1.28
VPS13B-202ENST00000357162 CCDC138Q96M89 665 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms