RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 NAALADL2Q58DX5 795 aa4.55□□□□□ -1.68
LIG4-201ENST00000356922 FBXO46Q6PJ61 603 aaPredicted RBP4.55□□□□□ -1.68
LIG4-201ENST00000356922 MOXD1Q6UVY6 613 aa4.55□□□□□ -1.68
LIG4-201ENST00000356922 CLEC17AQ6ZS10 378 aa4.55□□□□□ -1.68
LIG4-201ENST00000356922 DIS3LQ8TF46 1054 aaKnown RBP4.55□□□□□ -1.68
LIG4-201ENST00000356922 SCFD2Q8WU76 684 aa4.55□□□□□ -1.68
LIG4-201ENST00000356922 ERCC4Q92889 916 aaPredicted RBP4.55□□□□□ -1.68
LIG4-201ENST00000356922 PNMA5Q96PV4 448 aa4.55□□□□□ -1.68
LIG4-201ENST00000356922 C16orf70Q9BSU1 422 aa4.55□□□□□ -1.68
LIG4-201ENST00000356922 RNF208Q9H0X6 261 aa4.55□□□□□ -1.68
LIG4-201ENST00000356922 VTA1Q9NP79 307 aa4.55□□□□□ -1.68
LIG4-201ENST00000356922 LMBRD1Q9NUN5 540 aa4.55□□□□□ -1.68
LIG4-201ENST00000356922 SRPRBQ9Y5M8 271 aaKnown RBP4.55□□□□□ -1.68
LIG4-201ENST00000356922 ATG7O95352 703 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 LIG1P18858 919 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 ZNF200P98182 395 aaPredicted RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 KARSQ15046 597 aaKnown RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 IQSEC1Q6DN90 963 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 SWSAP1Q6NVH7 229 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 CXCL17Q6UXB2 119 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 TLK2Q86UE8 772 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 DHX37Q8IY37 1157 aaKnown RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 PIGOQ8TEQ8 1089 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 TRAPPC12Q8WVT3 735 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 STAMQ92783 540 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 SPATA32Q96LK8 384 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 SPATA33Q96N06 139 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 SENP7Q9BQF6 1050 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 TRANK1O15050 2925 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 POTEB3A0JP26 581 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 A6NJR5 290 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 ZBTB42B2RXF5 422 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 GAS7O60861 476 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 C6orf222P0C671 652 aaPredicted RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 TGFB3P10600 412 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 EN2P19622 333 aaPredicted RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 MARK3P27448 753 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 TCF7P36402 384 aaPredicted RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 ME1P48163 572 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 NDUFA8P51970 172 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 SOX10P56693 466 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 PPP2R5CQ13362 524 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 SNW1Q13573 536 aaKnown RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 TTLL4Q14679 1199 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 ZRSR1Q15695 479 aaKnown RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 UTP14CQ5TAP6 766 aaKnown RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 MFSD14CQ5VZR4 134 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 NCAPH2Q6IBW4 605 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 XRRA1Q6P2D8 792 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 POTEBQ6S5H4 581 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 METTL7BQ6UX53 244 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 NIPA1Q7RTP0 329 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 MSL3Q8N5Y2 521 aaKnown RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 PDILTQ8N807 584 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 SLAIN1Q8ND83 568 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 GPT2Q8TD30 523 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 SYMPKQ92797 1274 aaKnown RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 FERMT2Q96AC1 680 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 DYDC2Q96IM9 177 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 CTAGE1Q96RT6 745 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 OSBPL7Q9BZF2 842 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 MAF1Q9H063 256 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 JPH1Q9HDC5 661 aaPredicted RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 PRDM10Q9NQV6 1147 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 DISC1Q9NRI5 854 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 SLC9A2Q9UBY0 812 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 WDR81Q562E7 1941 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 IGKV6D-21A0A0A0MT36 114 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 MARCH6O60337 910 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 GCFC2P16383 781 aaKnown RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 NPEPPSP55786 919 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 CHMP4BP1P59074 171 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 GRB10Q13322 594 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 STK38Q15208 465 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 KCNA10Q16322 511 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 GNASQ5JWF2 1037 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 POTEGQ6S5H5 508 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 DTHD1Q6ZMT9 781 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 ANO5Q75V66 913 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 NLRX1Q86UT6 975 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 GRAMD1CQ8IYS0 662 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 KLHDC9Q8NEP7 349 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 FAM20AQ96MK3 541 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 EIF2AK1Q9BQI3 630 aaKnown RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.54□□□□□ -1.68
LIG4-201ENST00000356922 MLXIPQ9HAP2 919 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 HMX1Q9NP08 348 aaPredicted RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 SLC5A4Q9NY91 659 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 DDX20Q9UHI6 824 aaKnown RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 FAM184BQ9ULE4 1060 aa4.54□□□□□ -1.68
LIG4-201ENST00000356922 NOL7Q9UMY1 257 aaKnown RBP4.54□□□□□ -1.68
LIG4-201ENST00000356922 E9PMD0 336 aa4.53□□□□□ -1.68
LIG4-201ENST00000356922 MAFGO15525 162 aa4.53□□□□□ -1.68
LIG4-201ENST00000356922 DUSP11O75319 330 aaKnown RBP4.53□□□□□ -1.68
LIG4-201ENST00000356922 NR1I2O75469 434 aa4.53□□□□□ -1.68
LIG4-201ENST00000356922 YEATS4O95619 227 aa4.53□□□□□ -1.68
LIG4-201ENST00000356922 ASGR1P07306 291 aa4.53□□□□□ -1.68
LIG4-201ENST00000356922 MMP3P08254 477 aa4.53□□□□□ -1.68
LIG4-201ENST00000356922 AKR1A1P14550 325 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms