RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 KDM5DQ9BY66 1539 aa11.88□□□□□ -0.51
GTF3C1-201ENST00000356183 CA4P22748 312 aa11.88□□□□□ -0.51
GTF3C1-201ENST00000356183 HADHAP40939 763 aa11.88□□□□□ -0.51
GTF3C1-201ENST00000356183 TMPRSS15P98073 1019 aa11.88□□□□□ -0.51
GTF3C1-201ENST00000356183 SCRN1Q12765 414 aa11.88□□□□□ -0.51
GTF3C1-201ENST00000356183 OLFML2BQ68BL8 750 aa11.88□□□□□ -0.51
GTF3C1-201ENST00000356183 LRRC47Q8N1G4 583 aaKnown RBP11.88□□□□□ -0.51
GTF3C1-201ENST00000356183 ZWILCHQ9H900 591 aa11.88□□□□□ -0.51
GTF3C1-201ENST00000356183 A2MP01023 1474 aa11.88□□□□□ -0.51
GTF3C1-201ENST00000356183 PFKFB2O60825 505 aa11.88□□□□□ -0.51
GTF3C1-201ENST00000356183 CALN1Q9BXU9 219 aa11.88□□□□□ -0.51
GTF3C1-201ENST00000356183 TLR3O15455 904 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 NBNO60934 754 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 SARM1Q6SZW1 724 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 SUPT20HQ8NEM7 779 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 ZNF274Q96GC6 653 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 NAF1Q96HR8 494 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 TEKT3Q9BXF9 490 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 KLC2Q9H0B6 622 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 UBE2TQ9NPD8 197 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 CCPG1Q9ULG6 757 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 ABCC1P33527 1531 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 SRGAP2O75044 1071 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 DAB1O75553 588 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 CYP2C19P33261 490 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 TRPC1P48995 793 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 EPM2AIP1Q7L775 607 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 NEK8Q86SG6 692 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 PI4K2BQ8TCG2 481 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 FAM161BQ96MY7 647 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 SUGCTQ9HAC7 445 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 ATP8A2Q9NTI2 1148 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 A0A1W2PP64 1363 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 ADCY9O60503 1353 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 PDE8AO60658 829 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 HDAC4P56524 1084 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 ARMC2Q8NEN0 867 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 KRT4P19013 534 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 BRD2P25440 801 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 EIF4A3P38919 411 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 KPNA2P52292 529 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 CYP4A11Q02928 519 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 SPARCL1Q14515 664 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 PPP2R5BQ15173 497 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 BBS9Q3SYG4 887 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 FAM47CQ5HY64 1035 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 CAPRIN2Q6IMN6 1127 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 DPP8Q6V1X1 898 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 CCDC24Q8N4L8 307 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 PLBD2Q8NHP8 589 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 FBXO2Q9UK22 296 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 KIAA1024Q9UPX6 916 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 TRAF3IP3Q9Y228 551 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 CHL1O00533 1208 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 ZBTB24O43167 697 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 NAA30Q147X3 362 aaPredicted RBP11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 KLC3Q6P597 504 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 TTC30BQ8N4P2 665 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 MIS12Q9H081 205 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 GTSE1Q9NYZ3 720 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 ADA2Q9NZK5 511 aa11.87□□□□□ -0.51
GTF3C1-201ENST00000356183 RASSF10A6NK89 507 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 GOLGA8MH3BSY2 632 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 ANP32DO95626 131 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 HSPD1P10809 573 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 CCDC15Q0P6D6 951 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 CABLES1Q8TDN4 633 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 ANKRD7Q92527 254 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 SEPT9Q9UHD8 586 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 PSMC2P35998 433 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 POLA2Q14181 598 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 TBCCQ15814 346 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 MDH1BQ5I0G3 518 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 FAF2Q96CS3 445 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 ANKRD36BP1Q96IX9 119 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 NT5C1BQ96P26 610 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■■■■□ 24.9
GTF3C1-201ENST00000356183 SAYSD1Q9NPB0 183 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 ATP11BQ9Y2G3 1177 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 TSC22D4Q9Y3Q8 395 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 SCG2P13521 617 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 ADD1P35611 737 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 SDR42E1Q8WUS8 393 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 FAM193BQ96PV7 902 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 GSDMAQ96QA5 445 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 OSBPL3Q9H4L5 887 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 GCNT4Q9P109 453 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 PJA2O43164 708 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 CHEK2O96017 543 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 FBXW4P57775 412 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 B4GALNT2Q8NHY0 566 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 SNX19Q92543 992 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 DCTN4Q9UJW0 460 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 APOBEC2Q9Y235 224 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 COL4A3BPQ9Y5P4 624 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 ASXL2Q76L83 1435 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 A0A0D9SFI3 127 aa11.86□□□□□ -0.51
GTF3C1-201ENST00000356183 XPAP23025 273 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms