RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 ATP6V0A2Q9Y487 856 aa20.68■□□□□ 0.9
PRPF39-201ENST00000355765 DUOX1Q9NRD9 1551 aa20.68■□□□□ 0.9
PRPF39-201ENST00000355765 TLDC2A0PJX2 215 aa20.68■□□□□ 0.9
PRPF39-201ENST00000355765 BRD2P25440 801 aaKnown RBP20.68■□□□□ 0.9
PRPF39-201ENST00000355765 LETM2Q2VYF4 491 aa20.68■□□□□ 0.9
PRPF39-201ENST00000355765 HEATR3Q7Z4Q2 680 aa20.68■□□□□ 0.9
PRPF39-201ENST00000355765 PRCCQ92733 491 aaPredicted RBP20.68■□□□□ 0.9
PRPF39-201ENST00000355765 SWAP70Q9UH65 585 aa20.68■□□□□ 0.9
PRPF39-201ENST00000355765 DOCK2Q92608 1830 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 ENO4A6NNW6 628 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 KRIT1O00522 736 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 PDE8AO60658 829 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 DIAPH2O60879 1101 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 KCNJ2P63252 427 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 MTMR3Q13615 1198 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 SLC18A3Q16572 532 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 LRRC34Q8IZ02 419 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 ANKS4BQ8N8V4 417 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 ARMC2Q8NEN0 867 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 ZCRB1Q8TBF4 217 aaKnown RBP20.67■□□□□ 0.9
PRPF39-201ENST00000355765 RNF217Q8TC41 542 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 MICAL1Q8TDZ2 1067 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 ZNF570Q96NI8 536 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 KLHL30Q0D2K2 578 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 ABCF3Q9NUQ8 709 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 SLC12A4Q9UP95 1085 aa20.67■□□□□ 0.9
PRPF39-201ENST00000355765 MYMKA6NI61 221 aa20.66■□□□□ 0.9
PRPF39-201ENST00000355765 SHBGP04278 402 aa20.66■□□□□ 0.9
PRPF39-201ENST00000355765 LRRC55Q6ZSA7 311 aa20.66■□□□□ 0.9
PRPF39-201ENST00000355765 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.66■□□□□ 0.9
PRPF39-201ENST00000355765 SPAG5Q96R06 1193 aa20.66■□□□□ 0.9
PRPF39-201ENST00000355765 TRIM51Q9BSJ1 452 aa20.66■□□□□ 0.9
PRPF39-201ENST00000355765 CEP72Q9P209 647 aa20.66■□□□□ 0.9
PRPF39-201ENST00000355765 FAM170AA1A519 330 aa20.66■□□□□ 0.9
PRPF39-201ENST00000355765 KIF3CO14782 793 aa20.66■□□□□ 0.9
PRPF39-201ENST00000355765 CCNT1O60563 726 aaKnown RBP20.66■□□□□ 0.9
PRPF39-201ENST00000355765 CALRP27797 417 aaKnown RBP20.66■□□□□ 0.9
PRPF39-201ENST00000355765 INHBEP58166 350 aa20.66■□□□□ 0.9
PRPF39-201ENST00000355765 C11orf91Q3C1V1 193 aa20.66■□□□□ 0.9
PRPF39-201ENST00000355765 ZNF317Q96PQ6 595 aaPredicted RBP20.66■□□□□ 0.9
PRPF39-201ENST00000355765 RIOK1Q9BRS2 568 aaKnown RBP20.66■□□□□ 0.9
PRPF39-201ENST00000355765 CUEDC2Q9H467 287 aa20.66■□□□□ 0.9
PRPF39-201ENST00000355765 CYP2D6P10635 497 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 IFNAR2P48551 515 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 METTL13Q8N6R0 699 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 PRDM11Q9NQV5 511 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 A8MUI8 341 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 PGRMC1O00264 195 aaKnown RBP20.65■□□□□ 0.9
PRPF39-201ENST00000355765 OR52Z1P0C646 297 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 AMPD3Q01432 767 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 TAX1BP1Q86VP1 789 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 GOPCQ9HD26 462 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 CD2APQ9Y5K6 639 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 MYH1P12882 1939 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 MYH4Q9Y623 1939 aa20.65■□□□□ 0.9
PRPF39-201ENST00000355765 ERVV-2B6SEH9 535 aa20.64■□□□□ 0.9
PRPF39-201ENST00000355765 VIMP08670 466 aaKnown RBP20.64■□□□□ 0.9
PRPF39-201ENST00000355765 PPP1R2P41236 205 aa20.64■□□□□ 0.9
PRPF39-201ENST00000355765 SPICE1Q8N0Z3 855 aa20.64■□□□□ 0.9
PRPF39-201ENST00000355765 MMTAG2Q9BU76 263 aaKnown RBP20.64■□□□□ 0.9
PRPF39-201ENST00000355765 A0A0G2JS52 829 aa20.64■□□□□ 0.89
PRPF39-201ENST00000355765 M0R2N6 131 aa20.64■□□□□ 0.89
PRPF39-201ENST00000355765 USP11P51784 963 aa20.64■□□□□ 0.89
PRPF39-201ENST00000355765 UHMK1Q8TAS1 419 aaKnown RBP20.64■□□□□ 0.89
PRPF39-201ENST00000355765 TLCD1Q96CP7 247 aa20.64■□□□□ 0.89
PRPF39-201ENST00000355765 MAGEF1Q9HAY2 307 aa20.64■□□□□ 0.89
PRPF39-201ENST00000355765 WTIPA6NIX2 430 aaPredicted RBP20.64■□□□□ 0.89
PRPF39-201ENST00000355765 UPP2O95045 317 aa20.64■□□□□ 0.89
PRPF39-201ENST00000355765 SEMA3FQ13275 785 aa20.64■□□□□ 0.89
PRPF39-201ENST00000355765 CAPRIN2Q6IMN6 1127 aaKnown RBP20.64■□□□□ 0.89
PRPF39-201ENST00000355765 CNOT10Q9H9A5 744 aaKnown RBP20.64■□□□□ 0.89
PRPF39-201ENST00000355765 PCDH11XQ9BZA7 1347 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 PCDH11YQ9BZA8 1340 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 TSPY2A6NKD2 308 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 SV2BQ7L1I2 683 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 TRPM8Q7Z2W7 1104 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 KIF2BQ8N4N8 673 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 EIF1ADQ8N9N8 165 aaKnown RBP20.63■□□□□ 0.89
PRPF39-201ENST00000355765 PARD3BQ8TEW8 1205 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 L3MBTL3Q96JM7 780 aaPredicted RBP20.63■□□□□ 0.89
PRPF39-201ENST00000355765 PRMT1Q99873 361 aaKnown RBP20.63■□□□□ 0.89
PRPF39-201ENST00000355765 FGFR1OPO95684 399 aaKnown RBP20.63■□□□□ 0.89
PRPF39-201ENST00000355765 ALDH5A1P51649 535 aaPredicted RBP20.63■□□□□ 0.89
PRPF39-201ENST00000355765 CRELD2Q6UXH1 353 aaPredicted RBP20.63■□□□□ 0.89
PRPF39-201ENST00000355765 ADAT2Q7Z6V5 191 aaKnown RBP20.63■□□□□ 0.89
PRPF39-201ENST00000355765 ZBTB10Q96DT7 871 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 NLRP3Q96P20 1036 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.63■□□□□ 0.894e-8■■■■□ 20.1
PRPF39-201ENST00000355765 FAM167BQ9BTA0 163 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 NOP53Q9NZM5 478 aaKnown RBP20.63■□□□□ 0.89
PRPF39-201ENST00000355765 SAMD15Q9P1V8 674 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 ASAP1Q9ULH1 1129 aa20.63■□□□□ 0.89
PRPF39-201ENST00000355765 TRAF5O00463 557 aa20.62■□□□□ 0.89
PRPF39-201ENST00000355765 UBOX5O94941 541 aa20.62■□□□□ 0.89
PRPF39-201ENST00000355765 TMED8Q6PL24 325 aaPredicted RBP20.62■□□□□ 0.89
PRPF39-201ENST00000355765 ACTRT1Q8TDG2 376 aa20.62■□□□□ 0.89
PRPF39-201ENST00000355765 PBKQ96KB5 322 aa20.62■□□□□ 0.89
PRPF39-201ENST00000355765 CPVLQ9H3G5 476 aa20.62■□□□□ 0.89
PRPF39-201ENST00000355765 BATF3Q9NR55 127 aa20.62■□□□□ 0.89
PRPF39-201ENST00000355765 SPATS2LQ9NUQ6 558 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms