RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PRPF38AQ8NAV1 312 aaKnown RBP9.55□□□□□ -0.88
TRIM55-204ENST00000353317 ANKRD20A12PQ8NF67 263 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 CLEC4DQ8WXI8 215 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 LPAR1Q92633 364 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 ATG4CQ96DT6 458 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 SH2D4AQ9H788 454 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 PICK1Q9NRD5 415 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 HDAC6Q9UBN7 1215 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 CENPFP49454 3210 aa9.55□□□□□ -0.88
TRIM55-204ENST00000353317 FAM86B1E9PN63 330 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 GRIN3BO60391 1043 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 PHACTR2O75167 634 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 FAM86B2P0C5J1 330 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 TXKP42681 527 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 PMS1P54277 932 aaKnown RBP9.54□□□□□ -0.88
TRIM55-204ENST00000353317 TREML2Q5T2D2 321 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 WDR93Q6P2C0 686 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 TRAPPC11Q7Z392 1133 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 LENG9Q96B70 501 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 R3HDMLQ9H3Y0 253 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 ELP3Q9H9T3 547 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 SLC38A10Q9HBR0 1119 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 PPP1R9AQ9ULJ8 1098 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 IRF6O14896 467 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 TRIM66O15016 1216 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 WDR59Q6PJI9 974 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 FAM160B2Q86V87 743 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 REPS2Q8NFH8 660 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 OR8K1Q8NGG5 319 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 CCDC102AQ96A19 550 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 HOMER2Q9NSB8 354 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 GINM1Q9NU53 330 aa9.54□□□□□ -0.88
TRIM55-204ENST00000353317 RNF216Q9NWF9 866 aaPredicted RBP9.54□□□□□ -0.88
TRIM55-204ENST00000353317 POTEMA6NI47 508 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 MYO1CO00159 1063 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 VWA5AO00534 786 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 SRGAP2O75044 1071 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 OR52Z1P0C646 297 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 ARHGAP4P98171 946 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 DTHD1Q6ZMT9 781 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 ADSSL1Q8N142 457 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 MB21D1Q8N884 522 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 HOOK2Q96ED9 719 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 DNAJC7Q99615 494 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 PYM1Q9BRP8 204 aaKnown RBP9.53□□□□□ -0.88
TRIM55-204ENST00000353317 GBP3Q9H0R5 595 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 RMND1Q9NWS8 449 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 CWC15Q9P013 229 aaKnown RBP9.53□□□□□ -0.88
TRIM55-204ENST00000353317 VGLL3A8MV65 326 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 PIK3CDO00329 1044 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 ATP1A1P05023 1023 aaKnown RBP9.53□□□□□ -0.88
TRIM55-204ENST00000353317 ICAM1P05362 532 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 TUBBP07437 444 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 GJA5P36382 358 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 HERVK_113P62684 666 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 ECM1Q16610 540 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 PPP4R3AQ6IN85 833 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 FOXR1Q6PIV2 292 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 LEKR1Q6ZMV7 388 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 SRLQ86TD4 932 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 FAM71BQ8TC56 605 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 ZNF507Q8TCN5 953 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 ZC3H15Q8WU90 426 aaKnown RBP9.53□□□□□ -0.88
TRIM55-204ENST00000353317 C12orf42Q96LP6 360 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 MMS19Q96T76 1030 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 TSPYL1Q9H0U9 437 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 HAUS4Q9H6D7 363 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 CCPG1Q9ULG6 757 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 LUC7L2Q9Y383 392 aaKnown RBP9.53□□□□□ -0.88
TRIM55-204ENST00000353317 LCTP09848 1927 aa9.53□□□□□ -0.88
TRIM55-204ENST00000353317 LGALS16A8MUM7 142 aa9.52□□□□□ -0.88
TRIM55-204ENST00000353317 PES1O00541 588 aaKnown RBP9.52□□□□□ -0.88
TRIM55-204ENST00000353317 LONP1P36776 959 aaKnown RBP9.52□□□□□ -0.88
TRIM55-204ENST00000353317 PRPHP41219 470 aa9.52□□□□□ -0.88
TRIM55-204ENST00000353317 STAT6P42226 847 aa9.52□□□□□ -0.88
TRIM55-204ENST00000353317 HSP90B2PQ58FF3 399 aa9.52□□□□□ -0.88
TRIM55-204ENST00000353317 OTUD5Q96G74 571 aa9.52□□□□□ -0.88
TRIM55-204ENST00000353317 RRAGCQ9HB90 399 aa9.52□□□□□ -0.88
TRIM55-204ENST00000353317 DISC1Q9NRI5 854 aa9.52□□□□□ -0.88
TRIM55-204ENST00000353317 DDX25Q9UHL0 483 aaKnown RBP9.52□□□□□ -0.88
TRIM55-204ENST00000353317 CAPN11Q9UMQ6 739 aa9.52□□□□□ -0.88
TRIM55-204ENST00000353317 ADAMTS5Q9UNA0 930 aa9.52□□□□□ -0.88
TRIM55-204ENST00000353317 ALAS1P13196 640 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 SREBF1P36956 1147 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 USP14P54578 494 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 TMEM132BQ14DG7 1078 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 CALCRLQ16602 461 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 CCDC122Q5T0U0 273 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 CATSPERGQ6ZRH7 1159 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 C10orf67Q8IYJ2 551 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 IL31RAQ8NI17 732 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 EEF2KMTQ96G04 330 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 MBOAT7Q96N66 472 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 AS3MTQ9HBK9 375 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 AGPAT5Q9NUQ2 364 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 ZNF214Q9UL59 606 aaPredicted RBP9.52□□□□□ -0.89
TRIM55-204ENST00000353317 SAR1BQ9Y6B6 198 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 IGLV3-22A0A075B6J6 115 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 CYP3A7-CYP3A51PA0A087WV96 503 aa9.52□□□□□ -0.89
TRIM55-204ENST00000353317 A0A1W2PQC6 194 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms